From 1b5e4b045bfd5b5a782d8aef90ef7f0493c151b2 Mon Sep 17 00:00:00 2001 From: Thomas White Date: Mon, 2 Oct 2017 03:12:45 +0200 Subject: indexamajig: Add missing documentation for --check-peaks --- doc/man/indexamajig.1 | 5 +++++ 1 file changed, 5 insertions(+) (limited to 'doc') diff --git a/doc/man/indexamajig.1 b/doc/man/indexamajig.1 index 683c14b0..84322447 100644 --- a/doc/man/indexamajig.1 +++ b/doc/man/indexamajig.1 @@ -341,6 +341,11 @@ Disable retry indexing. After an unsuccessful indexing attempt, indexamajig wou .PD Skip the prediction refinement step. Usually this will decrease the quality of the results and allow false solutions to get through, but occasionally it might be necessary. +.PD 0 +.IP \fB--check-peaks +.PD +Check that most of the peaks can be accounted for by the indexing solution. This usually increases the quality of the indexing solutions, but prevents "subtract and retry" multi-lattice indexing from working well. + .PD 0 .IP \fB--taketwo-member-threshold=\fIn\fR .IP \fB--taketwo-len-tolerance=\fIn\fR -- cgit v1.2.3