From e780598a036ed7996171436fa59b2f9f155b7af7 Mon Sep 17 00:00:00 2001 From: Thomas White Date: Mon, 20 Feb 2023 16:26:21 +0100 Subject: Fix small manual problems --- doc/man/crystfel.7 | 2 +- doc/man/indexamajig.1 | 10 +++++++--- 2 files changed, 8 insertions(+), 4 deletions(-) (limited to 'doc') diff --git a/doc/man/crystfel.7 b/doc/man/crystfel.7 index 243d8d1b..e04b7644 100644 --- a/doc/man/crystfel.7 +++ b/doc/man/crystfel.7 @@ -145,7 +145,7 @@ Report bugs to , or visit .SH COPYRIGHT AND DISCLAIMER .PD 0 -Copyright © 2012-2021 Deutsches Elektronen-Synchrotron DESY, a research centre of the Helmholtz Association. +Copyright © 2012-2023 Deutsches Elektronen-Synchrotron DESY, a research centre of the Helmholtz Association. .PD .PP Please read the AUTHORS file in the CrystFEL source code distribution for a full list of contributions and contributors. diff --git a/doc/man/indexamajig.1 b/doc/man/indexamajig.1 index b335f74c..c8d9ff79 100644 --- a/doc/man/indexamajig.1 +++ b/doc/man/indexamajig.1 @@ -29,8 +29,7 @@ For minimal basic use, you need to provide the list of diffraction patterns, the -i mypatterns.lst -g mygeometry.geom --indexing=mosflm,dirax --peaks=hdf5 -o test.stream -p mycell.pdb .PP -More typical use includes all the above, but might also include extra parameters to modify the behaviour. For example, you'll probably want to -run more than one indexing job at a time (-j ). +More typical use includes all the above, but might also include extra parameters to modify the behaviour. For example, you'll probably want to run more than one indexing job at a time (-j ). See \fBman crystfel_geometry\fR for information about how to create a file describing the detector geometry and beam characteristics. @@ -362,6 +361,11 @@ CrystFEL considers all peak locations to be distances from the corner of the det .PD With this option with \fB--peaks=hdf5\fR (or \fBcxi\fR or \fBmsgpack\fR), the peaks will additionally be checked to see that they satisfy the minimum SNR specified with \fB--min-snr\fR. +.PD 0 +.IP \fB--peakfinder8-fast\fR +.PD +(peakfinder8 only) Increase speed by pre-calculating some coordinate tables. + .SH INDEXING OPTIONS .PD 0 .IP \fB--indexing=\fR\fImethod\fR @@ -639,7 +643,7 @@ This page was written by Thomas White, Yaroslav Gevorkov and Valerio Mariani. Report bugs to , or visit . .SH COPYRIGHT AND DISCLAIMER -Copyright © 2012-2021 Deutsches Elektronen-Synchrotron DESY, a research centre of the Helmholtz Association. +Copyright © 2012-2023 Deutsches Elektronen-Synchrotron DESY, a research centre of the Helmholtz Association. .P indexamajig, and this manual, are part of CrystFEL. .P -- cgit v1.2.3