From 65fc280b52ebe01a7965e593f3e6565a51c572a7 Mon Sep 17 00:00:00 2001
From: Thomas White <taw@physics.org>
Date: Fri, 6 Dec 2013 11:19:39 +0100
Subject: Count implausible reflections when integrating with prof2d

---
 libcrystfel/src/integration.c | 5 +++++
 1 file changed, 5 insertions(+)

(limited to 'libcrystfel/src')

diff --git a/libcrystfel/src/integration.c b/libcrystfel/src/integration.c
index 98239607..1b2193fa 100644
--- a/libcrystfel/src/integration.c
+++ b/libcrystfel/src/integration.c
@@ -1353,6 +1353,11 @@ static void integrate_prof2d_once(struct intcontext *ic, struct peak_box *bx)
 		pss += bx->offs_ss;
 		set_detector_pos(bx->refl, 0.0, pfs, pss);
 
+		if ( bx->intensity < -5.0*bx->sigma ) {
+			ic->n_implausible++;
+			set_redundancy(bx->refl, 0);
+		}
+
 		if ( get_int_diag(ic, bx->refl) ) show_peak_box(ic, bx);
 
 	} else {
-- 
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