From 7d2966b89351f3464802ee1691d1c8a8d47d2ae8 Mon Sep 17 00:00:00 2001 From: Thomas White Date: Mon, 9 Sep 2019 15:08:18 +0200 Subject: turbo-index-slurm: Remove --workdir option In the latest version, it's been renamed to --chdir. But it's not necessary anyway. The default working directory is the sbatch caller's directory. --- scripts/turbo-index-slurm | 1 - 1 file changed, 1 deletion(-) (limited to 'scripts') diff --git a/scripts/turbo-index-slurm b/scripts/turbo-index-slurm index b20af403..bd3d7a07 100755 --- a/scripts/turbo-index-slurm +++ b/scripts/turbo-index-slurm @@ -68,7 +68,6 @@ for FILE in split-events-${RUN}.lst*; do #echo "#SBATCH --nice=100" >> $SLURMFILE echo >> $SLURMFILE - echo "#SBATCH --workdir $PWD" >> $SLURMFILE echo "#SBATCH --job-name $NAME" >> $SLURMFILE echo "#SBATCH --output $NAME-%N-%j.out" >> $SLURMFILE echo "#SBATCH --error $NAME-%N-%j.err" >> $SLURMFILE -- cgit v1.2.3