cmake_minimum_required(VERSION 3.6) set(CRYSTFEL_SHORT_VERSION 0.10.1) set(CRYSTFEL_VERSION ${CRYSTFEL_SHORT_VERSION}) set(CRYSTFEL_API_VERSION 15) project(crystfel VERSION ${CRYSTFEL_VERSION} LANGUAGES C) cmake_policy(SET CMP0074 NEW) include(GNUInstallDirs) # Set CMAKE_MODULE_PATH to assist cmake in finding our own package definitions set(CMAKE_MODULE_PATH ${CMAKE_MODULE_PATH} "${CMAKE_SOURCE_DIR}/CMake") find_package(HDF5 REQUIRED COMPONENTS C HL) find_package(Threads REQUIRED) find_package(GSL REQUIRED) find_package(OpenCL) find_package(PkgConfig) # Request HDF5 1.10-style API (can't use 1.12-style yet) add_definitions(-DH5_USE_110_API) add_definitions(-DH5O_GET_INFO_BY_IDX1) pkg_check_modules (GLIB glib-2.0) include_directories (${GLIB_INCLUDE_DIRS}) link_directories (${GLIB_LIBRARY_DIRS}) set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Wall") pkg_search_module(ZMQ libzmq) if (ZMQ_FOUND) message(STATUS "Found ZMQ") else () message(STATUS "ZMQ not found.") endif () pkg_search_module(ASAPO libasapo-consumer) if (ASAPO_FOUND) message(STATUS "Found ASAP::O") else () message(STATUS "ASAP::O not found") endif () # Find out where forkpty() is declared set(CMAKE_REQUIRED_LIBRARIES "-lutil") check_symbol_exists(forkpty "pty.h" HAVE_FORKPTY_PTY_H) check_symbol_exists(forkpty "util.h" HAVE_FORKPTY_UTIL_H) unset(CMAKE_REQUIRED_LIBRARIES) if(HAVE_FORKPTY_PTY_H) message(STATUS "Found forkpty() in pty.h") elseif(HAVE_FORKPTY_UTIL_H) message(STATUS "Found forkpty() in util.h") else() message(SEND_ERROR "Couldn't find forkpty()") endif() pkg_search_module(GTK gtk+-3.0) if (GTK_FOUND) set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Wno-deprecated-declarations") link_directories(${GTK_LIBRARY_DIRS}) find_program(GLIB_COMPILE_RESOURCES NAMES glib-compile-resources REQUIRED) add_custom_command(OUTPUT crystfel-gresources.c WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/data VERBATIM COMMAND ${GLIB_COMPILE_RESOURCES} ARGS --generate-source --target=${CMAKE_CURRENT_BINARY_DIR}/crystfel-gresources.c crystfel.gresource.xml) add_custom_target(crystfel-gresources DEPENDS ${CMAKE_CURRENT_BINARY_DIR}/crystfel-gresources.c) endif () # If no version of GTK was found, try for GDK if (NOT GTK_FOUND) message(STATUS "GTK3 not found. GUI parts will not be compiled") message(STATUS "Looking separately for GDK") pkg_search_module(GDK gdk-3.0) if (NOT GDK_FOUND) message(STATUS "GDK not found.") endif() endif() pkg_search_module(CAIRO cairo) pkg_search_module(GDKPIXBUF gdk-pixbuf-2.0) include(CheckCCompilerFlag) check_c_compiler_flag("-fdiagnostics-color=always" HAVE_DIAG_COLOR) if (HAVE_DIAG_COLOR) set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -fdiagnostics-color=always") endif (HAVE_DIAG_COLOR) include_directories(${CMAKE_CURRENT_SOURCE_DIR}) add_definitions(-DHAVE_CONFIG_H) set(CMAKE_C_STANDARD 99) # Common include directories and libraries set(COMMON_INCLUDES ${HDF5_INCLUDE_DIRS}) set(COMMON_LIBRARIES libcrystfel m GSL::gsl Threads::Threads) if (EXISTS ${CMAKE_CURRENT_SOURCE_DIR}/.git) # If this is a Git checkout, add the revision ID message(STATUS "This is a Git checkout: adding revision ID to version number") include(GetGitRevisionDescription) get_git_head_revision(GIT_REFSPEC GIT_SHA1) string(SUBSTRING ${GIT_SHA1} 0 8 GIT_SHA1) set(CRYSTFEL_VERSION "${CRYSTFEL_VERSION}+${GIT_SHA1}") else () if (DEFINED CRYSTFEL_SNAPSHOT_ID) message(STATUS "This is a packaged snapshot: adding snapshot ID to version number") set(CRYSTFEL_VERSION ${CRYSTFEL_VERSION}+${CRYSTFEL_SNAPSHOT_ID}) else () message(STATUS "This is a packaged release version") endif () endif () configure_file(src/version.c.cmake.in version.c) include(CheckIncludeFile) include(CheckLibraryExists) set(HAVE_CAIRO ${CAIRO_FOUND}) set(HAVE_GTK ${GTK_FOUND}) set(HAVE_OPENCL ${OpenCL_FOUND}) set(HAVE_GDKPIXBUF ${GDKPIXBUF_FOUND}) set(HAVE_GDK ${GDK_FOUND}) set(HAVE_ZMQ ${ZMQ_FOUND}) set(HAVE_HDF5 1) set(HAVE_ASAPO ${ASAPO_FOUND}) set(PACKAGE_VERSION ${PROJECT_VERSION}) check_include_file(fcntl.h HAVE_FCNTL_H) check_include_file(stdlib.h HAVE_STDLIB_H) check_include_file(unistd.h HAVE_UNISTD_H) # Workarounds for weird OpenCL quirks.. if (OpenCL_FOUND) # If include path ends with "OpenCL.framework", add the missing "/Headers" string(REGEX REPLACE "OpenCL.framework$" "OpenCL.framework/Headers" OpenCL_INCLUDE_DIRS ${OpenCL_INCLUDE_DIRS}) # Check if the header is actually "CL/cl.h" check_include_file(CL/cl.h HAVE_CL_CL_H "-I${OpenCL_INCLUDE_DIRS}") endif (OpenCL_FOUND) # Check for nice clock function check_symbol_exists(clock_gettime "time.h" HAVE_CLOCK_GETTIME) # Check for argp check_symbol_exists(argp_parse "argp.h" HAVE_ARGP) if (NOT HAVE_ARGP) message(ERROR " argp not found. If you're building on Mac OS using libraries" " from Homebrew, install argp-standalone.") endif (NOT HAVE_ARGP) # Add the libcrystfel target add_subdirectory(libcrystfel) configure_file(config.h.cmake.in config.h) include_directories(${CMAKE_CURRENT_BINARY_DIR}) # Add tests enable_testing() add_subdirectory(tests) # Install scripts install(DIRECTORY ${CMAKE_SOURCE_DIR}/scripts DESTINATION ${CMAKE_INSTALL_DOCDIR}) install(FILES ${CMAKE_SOURCE_DIR}/scripts/detector-shift ${CMAKE_SOURCE_DIR}/scripts/peakogram-stream DESTINATION ${CMAKE_INSTALL_BINDIR}) # Misc resources install(FILES ${CMAKE_SOURCE_DIR}/data/crystfel.svg DESTINATION ${CMAKE_INSTALL_DATADIR}/icons/hicolor/scalable/apps) # ---------------------------------------------------------------------- # partial_sim set(PARTIAL_SIM_SOURCES src/partial_sim.c) add_executable(partial_sim ${PARTIAL_SIM_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(partial_sim PRIVATE ${COMMON_INCLUDES}) target_link_libraries(partial_sim ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES partial_sim) # ---------------------------------------------------------------------- # pattern_sim set(PATTERN_SIM_SOURCES src/pattern_sim.c src/diffraction.c) if(HAVE_OPENCL) set(PATTERN_SIM_OPENCL_SOURCES src/cl-utils.c src/diffraction-gpu.c) endif(HAVE_OPENCL) add_executable(pattern_sim ${PATTERN_SIM_SOURCES} ${PATTERN_SIM_OPENCL_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(pattern_sim PRIVATE ${COMMON_INCLUDES}) target_link_libraries(pattern_sim ${COMMON_LIBRARIES} ${HDF5_C_LIBRARIES}) if(HAVE_OPENCL) target_include_directories(pattern_sim PRIVATE ${OpenCL_INCLUDE_DIRS}) target_link_libraries(pattern_sim ${OpenCL_LIBRARIES}) endif(HAVE_OPENCL) list(APPEND CRYSTFEL_EXECUTABLES pattern_sim) # ---------------------------------------------------------------------- # cell_explorer if (GTK_FOUND) set(CELL_EXPLORER_SOURCES src/cell_explorer.c src/multihistogram.c) add_executable(cell_explorer ${CELL_EXPLORER_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(cell_explorer PRIVATE ${COMMON_INCLUDES} ${GTK_INCLUDE_DIRS}) target_link_libraries(cell_explorer ${COMMON_LIBRARIES} ${GTK_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES cell_explorer) endif (GTK_FOUND) # ---------------------------------------------------------------------- # render_hkl if (CAIRO_FOUND) set(RENDER_HKL_SOURCES src/render_hkl.c) add_executable(render_hkl ${RENDER_HKL_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(render_hkl PRIVATE ${COMMON_INCLUDES} ${CAIRO_INCLUDE_DIRS}) target_link_libraries(render_hkl ${COMMON_LIBRARIES} ${CAIRO_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES render_hkl) endif (CAIRO_FOUND) # ---------------------------------------------------------------------- # process_hkl set(PROCESS_HKL_SOURCES src/process_hkl.c) add_executable(process_hkl ${PROCESS_HKL_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(process_hkl PRIVATE ${COMMON_INCLUDES}) target_link_libraries(process_hkl ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES process_hkl) # ---------------------------------------------------------------------- # list_events set(LIST_EVENTS_SOURCES src/list_events.c) add_executable(list_events ${LIST_EVENTS_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(list_events PRIVATE ${COMMON_INCLUDES}) target_link_libraries(list_events ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES list_events) # ---------------------------------------------------------------------- # indexamajig set(INDEXAMAJIG_SOURCES src/indexamajig.c src/im-sandbox.c src/process_image.c) if ( ZMQ_FOUND ) list(APPEND INDEXAMAJIG_SOURCES src/im-zmq.c) endif () if ( ASAPO_FOUND ) list(APPEND INDEXAMAJIG_SOURCES src/im-asapo.c) endif () add_executable(indexamajig ${INDEXAMAJIG_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(indexamajig PRIVATE ${COMMON_INCLUDES}) target_link_libraries(indexamajig ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES indexamajig) if ( ZMQ_FOUND ) target_include_directories(indexamajig PRIVATE ${ZMQ_INCLUDE_DIR}) target_link_libraries(indexamajig ${ZMQ_LDFLAGS}) endif () if ( ASAPO_FOUND ) target_include_directories(indexamajig PRIVATE ${ASAPO_INCLUDE_DIR}) target_link_libraries(indexamajig ${ASAPO_LDFLAGS}) endif () # ---------------------------------------------------------------------- # get_hkl set(GET_HKL_SOURCES src/get_hkl.c) add_executable(get_hkl ${GET_HKL_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(get_hkl PRIVATE ${COMMON_INCLUDES}) target_link_libraries(get_hkl ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES get_hkl) # ---------------------------------------------------------------------- # compare_hkl set(COMPARE_HKL_SOURCES src/compare_hkl.c) add_executable(compare_hkl ${COMPARE_HKL_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(compare_hkl PRIVATE ${COMMON_INCLUDES}) target_link_libraries(compare_hkl ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES compare_hkl) # ---------------------------------------------------------------------- # check_hkl set(CHECK_HKL_SOURCES src/check_hkl.c) add_executable(check_hkl ${CHECK_HKL_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(check_hkl PRIVATE ${COMMON_INCLUDES}) target_link_libraries(check_hkl ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES check_hkl) # ---------------------------------------------------------------------- # partialator set(PARTIALATOR_SOURCES src/partialator.c src/post-refinement.c src/merge.c src/rejection.c src/scaling.c) add_executable(partialator ${PARTIALATOR_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(partialator PRIVATE ${COMMON_INCLUDES}) target_link_libraries(partialator ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES partialator) # ---------------------------------------------------------------------- # ambigator set(AMBIGATOR_SOURCES src/ambigator.c) add_executable(ambigator ${AMBIGATOR_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(ambigator PRIVATE ${COMMON_INCLUDES}) target_link_libraries(ambigator ${COMMON_LIBRARIES} ${HDF5_C_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES ambigator) # ---------------------------------------------------------------------- # geoptimiser # FIXME! #if (GDKPIXBUF_FOUND) # target_include_directories(${PROJECT_NAME} PRIVATE ${GDKPIXBUF_INCLUDE_DIRS}) # target_link_libraries(${PROJECT_NAME} PRIVATE ${GDKPIXBUF_LIBRARIES}) #endif (GDKPIXBUF_FOUND) # FIXME: Restore! #set(GEOPTIMISER_SOURCES src/geoptimiser.c) #add_executable(geoptimiser ${GEOPTIMISER_SOURCES} # ${CMAKE_CURRENT_BINARY_DIR}/version.c) #target_include_directories(geoptimiser PRIVATE ${COMMON_INCLUDES}) #target_link_libraries(geoptimiser ${COMMON_LIBRARIES}) #list(APPEND CRYSTFEL_EXECUTABLES geoptimiser) # ## Add features one by one so that #ifdef HAVE_XX//#include XX.h always works ## If Cairo, gdk-pixbuf and GDK are all found, geoptimiser will add PNG support #if (CAIRO_FOUND) # target_include_directories(geoptimiser PRIVATE ${CAIRO_INCLUDE_DIRS}) # target_link_libraries(geoptimiser ${CAIRO_LIBRARIES}) #endif (CAIRO_FOUND) # #if (GDKPIXBUF_FOUND) # target_include_directories(geoptimiser PRIVATE ${GDKPIXBUF_INCLUDE_DIRS}) # target_link_libraries(geoptimiser ${GDKPIXBUF_LIBRARIES}) #endif (GDKPIXBUF_FOUND) # #if (GDK_FOUND) # target_include_directories(geoptimiser PRIVATE ${GDK_INCLUDE_DIRS}) # target_link_libraries(geoptimiser ${GDK_LIBRARIES}) #endif (GDK_FOUND) # ---------------------------------------------------------------------- # whirligig set(WHIRLIGIG_SOURCES src/whirligig.c) add_executable(whirligig ${WHIRLIGIG_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(whirligig PRIVATE ${COMMON_INCLUDES}) target_link_libraries(whirligig ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES whirligig) # ---------------------------------------------------------------------- # make_pixelmap set(MAKE_PIXELMAP_SOURCES src/make_pixelmap.c) add_executable(make_pixelmap ${MAKE_PIXELMAP_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(make_pixelmap PRIVATE ${COMMON_INCLUDES}) target_link_libraries(make_pixelmap ${COMMON_LIBRARIES} ${HDF5_C_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES make_pixelmap) # ---------------------------------------------------------------------- # cell_tool set(CELL_TOOL_SOURCES src/cell_tool.c) add_executable(cell_tool ${CELL_TOOL_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c) target_include_directories(cell_tool PRIVATE ${COMMON_INCLUDES}) target_link_libraries(cell_tool ${COMMON_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES cell_tool) # ---------------------------------------------------------------------- # crystfel (main graphical user interface) if (GTK_FOUND) set(CRYSTFEL_GUI_SOURCES src/crystfel_gui.c src/crystfelimageview.c src/gui_peaksearch.c src/gui_index.c src/gui_merge.c src/gui_backend_local.c src/gui_project.c src/crystfelindexingopts.c src/crystfelmergeopts.c src/crystfelsymmetryselector.c src/gtk-util-routines.c src/gui_fom.c src/gui_export.c src/gui_ambi.c src/gui_import.c src/gtkmultifilechooserbutton.c src/gui_backend_slurm.c src/crystfelcolourscale.c) add_executable(crystfel ${CRYSTFEL_GUI_SOURCES} ${CMAKE_CURRENT_BINARY_DIR}/version.c ${CMAKE_CURRENT_BINARY_DIR}/crystfel-gresources.c) target_include_directories(crystfel PRIVATE ${COMMON_INCLUDES} ${GTK_INCLUDE_DIRS}) target_link_libraries (crystfel ${COMMON_LIBRARIES} util ${GTK_LIBRARIES}) list(APPEND CRYSTFEL_EXECUTABLES crystfel) endif (GTK_FOUND) # ---------------------------------------------------------------------- # Install targets set_target_properties(${CRYSTFEL_EXECUTABLES} PROPERTIES INSTALL_RPATH_USE_LINK_PATH 1) list(FIND CMAKE_PLATFORM_IMPLICIT_LINK_DIRECTORIES "${CMAKE_INSTALL_LIBDIR}" isSystemDir) if("${isSystemDir}" STREQUAL "-1") set_target_properties(${CRYSTFEL_EXECUTABLES} PROPERTIES INSTALL_RPATH "${CMAKE_INSTALL_FULL_LIBDIR};${CMAKE_INSTALL_RPATH}") endif("${isSystemDir}" STREQUAL "-1") install(TARGETS ${CRYSTFEL_EXECUTABLES} RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR}) install(FILES doc/man/ambigator.1 doc/man/cell_explorer.1 doc/man/check_hkl.1 doc/man/compare_hkl.1 doc/man/geoptimiser.1 doc/man/get_hkl.1 doc/man/indexamajig.1 doc/man/list_events.1 doc/man/partialator.1 doc/man/partial_sim.1 doc/man/pattern_sim.1 doc/man/process_hkl.1 doc/man/render_hkl.1 doc/man/whirligig.1 doc/man/make_pixelmap.1 doc/man/cell_tool.1 DESTINATION ${CMAKE_INSTALL_MANDIR}/man1 ) install(FILES doc/man/crystfel.7 DESTINATION ${CMAKE_INSTALL_MANDIR}/man7 ) install(FILES doc/man/crystfel_geometry.5 DESTINATION ${CMAKE_INSTALL_MANDIR}/man5 )