reflist RefList Reflection RefListIterator reflist_new reflist_free reflection_new reflection_free add_refl add_refl_to_list first_refl next_refl find_refl next_found_refl get_excitation_error get_detector_pos get_partiality get_indices get_symmetric_indices get_intensity get_partial get_scalable get_refinable get_redundancy get_esd_intensity get_phase get_temp1 get_temp2 set_detector_pos set_partial set_intensity set_scalable set_refinable set_redundancy set_esd_intensity set_phase set_symmetric_indices set_temp1 set_temp2 copy_data num_reflections tree_depth lock_reflection unlock_reflection

reflist-utils write_reflist write_reflections_to_file read_reflections read_reflections_from_file asymmetric_indices res_cutoff check_list_symmetry copy_reflist find_equiv_in_list

unitcell UnitCell LatticeType UnitCellTransformation cell_new cell_new_from_cell cell_new_from_direct_axes cell_new_from_parameters cell_new_from_reciprocal_axes cell_free cell_get_cartesian cell_get_parameters cell_get_pointgroup cell_get_reciprocal cell_get_centering cell_get_lattice_type cell_get_unique_axis cell_set_cartesian cell_set_cartesian_a cell_set_cartesian_b cell_set_cartesian_c cell_set_parameters cell_set_pointgroup cell_set_reciprocal cell_set_centering cell_set_lattice_type cell_set_unique_axis cell_transform cell_transform_inverse tfn_combine tfn_identity tfn_from_intmat tfn_inverse tfn_print tfn_vector tfn_free cell_rep

cell-utils cell_rotate rotate_cell cell_print resolution match_cell match_cell_ab cell_is_sensible validate_cell uncenter_cell bravais_lattice right_handed str_lattice forbidden_reflection load_cell_from_pdb

utils show_matrix_eqn AssplodeFlag C_VACUO ELECTRON_CHARGE ERROR J_to_eV PLANCK STATUS THOMSON_LENGTH assplode biggest check_prefix chomp deg2rad eV_to_J gaussian_noise safe_basename progress_bar rad2deg is_odd poisson_noise notrail smallest ph_en_to_lambda ph_lambda_to_en

quaternion quaternion quaternion_modulus normalise_quaternion random_quaternion quaternion_valid quat_rot

image image ImageFeatureList image_add_feature image_feature_closest image_feature_count image_feature_list_free image_feature_list_new image_get_feature image_remove_feature

thread-pool TPGetTaskFunc TPWorkFunc TPFinalFunc run_threads

statistics stat_pearson_f_ignore stat_pearson_f_zero stat_pearson_i stat_r1_i stat_r1_ignore stat_r1_zero stat_r2 stat_rdiff_ignore stat_rdiff_intensity stat_rdiff_zero stat_scale_intensity

indexing IndexingMethod IndexingPrivate MAX_CELL_CANDIDATES build_indexer_list cleanup_indexing prepare_indexing index_pattern run_dirax run_mosflm map_all_peaks

symmetry SymOpList SymOpMask free_symoplist num_equivs get_pointgroup get_equiv special_position get_asymm get_ambiguities is_subgroup new_symopmask free_symopmask describe_symmetry symmetry_name is_centrosymmetric

integer_matrix IntegerMatrix intmat_new intmat_copy intmat_free intmat_get intmat_set intmat_intmat_mult intmat_intvec_mult intmat_det intmat_inverse intmat_equals intmat_is_identity intmat_is_inversion intmat_print

detector copy_geom fill_in_values free_detector_geometry get_detector_geometry write_detector_geometry find_panel find_panel_by_name find_panel_number simple_geometry record_image get_pixel_extents get_q get_q_for_panel get_tt smallest_q reverse_2d_mapping largest_q

hdf5-file hdf5_read hdf5_write hdfile hdfile_close hdfile_get_image_binned hdfile_get_string_value hdfile_open hdfile_read_group hdfile_set_first_image hdfile_set_image

stream parse_stream_flags read_chunk write_chunk write_stream_header skip_some_files is_stream get_value count_patterns

render render_get_colour_scale render_panels render_scale render_tiff_fp render_tiff_int16