/* * cell.h * * A class representing a unit cell * * Copyright © 2012 Deutsches Elektronen-Synchrotron DESY, * a research centre of the Helmholtz Association. * Copyright © 2012 Richard Kirian * Copyright © 2012 Lorenzo Galli * * Authors: * 2009-2012 Thomas White * 2010,2012 Richard Kirian * 2012 Lorenzo Galli * * This file is part of CrystFEL. * * CrystFEL is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * CrystFEL is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with CrystFEL. If not, see . * */ #ifndef CELL_H #define CELL_H #ifdef HAVE_CONFIG_H #include #endif #include "utils.h" /* A 3D vector in reciprocal space. * Note: Heavily abused to serve as a real space vector as well */ struct rvec { double u; double v; double w; }; typedef enum { L_TRICLINIC, L_MONOCLINIC, L_ORTHORHOMBIC, L_TETRAGONAL, L_RHOMBOHEDRAL, L_HEXAGONAL, L_CUBIC } LatticeType; /** * UnitCell: * * This data structure is opaque. You must use the available accessor functions * to read and write its contents. **/ typedef struct _unitcell UnitCell; extern UnitCell *cell_new(void); extern UnitCell *cell_new_from_cell(UnitCell *orig); extern void cell_free(UnitCell *cell); /* Lengths in m, angles in radians */ extern UnitCell *cell_new_from_parameters(double a, double b, double c, double alpha, double beta, double gamma); extern UnitCell *cell_new_from_reciprocal_axes(struct rvec as, struct rvec bs, struct rvec cs); extern UnitCell *cell_new_from_direct_axes(struct rvec as, struct rvec bs, struct rvec cs); extern void cell_set_cartesian(UnitCell *cell, double ax, double ay, double az, double bx, double by, double bz, double cx, double cy, double cz); extern void cell_set_parameters(UnitCell *cell, double a, double b, double c, double alpha, double beta, double gamma); extern void cell_set_cartesian_a(UnitCell *cell, double ax, double ay, double az); extern void cell_set_cartesian_b(UnitCell *cell, double bx, double by, double bz); extern void cell_set_cartesian_c(UnitCell *cell, double cx, double cy, double cz); extern void cell_set_spacegroup(UnitCell *cell, const char *sym); extern void cell_set_pointgroup(UnitCell *cell, const char *sym); extern int cell_get_parameters(UnitCell *cell, double *a, double *b, double *c, double *alpha, double *beta, double *gamma); extern int cell_get_cartesian(UnitCell *cell, double *ax, double *ay, double *az, double *bx, double *by, double *bz, double *cx, double *cy, double *cz); extern int cell_get_reciprocal(UnitCell *cell, double *asx, double *asy, double *asz, double *bsx, double *bsy, double *bsz, double *csx, double *csy, double *csz); extern void cell_set_reciprocal(UnitCell *cell, double asx, double asy, double asz, double bsx, double bsy, double bsz, double csx, double csy, double csz); extern const char *cell_get_pointgroup(UnitCell *cell); extern const char *cell_get_spacegroup(UnitCell *cell); extern LatticeType cell_get_lattice_type(UnitCell *cell); extern void cell_set_lattice_type(UnitCell *cell, LatticeType lattice_type); extern char cell_get_centering(UnitCell *cell); extern void cell_set_centering(UnitCell *cell, char centering); extern char cell_get_unique_axis(UnitCell *cell); extern void cell_set_unique_axis(UnitCell *cell, char unique_axis); extern const char *cell_rep(UnitCell *cell); #endif /* CELL_H */