/* * geometry.h * * Geometry of diffraction * * Copyright © 2013-2021 Deutsches Elektronen-Synchrotron DESY, * a research centre of the Helmholtz Association. * Copyright © 2012 Richard Kirian * * Authors: * 2010-2020 Thomas White * 2012 Richard Kirian * * This file is part of CrystFEL. * * CrystFEL is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * CrystFEL is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with CrystFEL. If not, see . * */ #ifndef GEOMETRY_H #define GEOMETRY_H #include "reflist.h" #include "cell.h" #include "crystal.h" #include "detgeom.h" #ifdef __cplusplus extern "C" { #endif /** * \file geometry.h * Geometry of diffraction * * This contains the prediction and partiality calculation functions. */ /** * A PartialityModel describes a geometrical model which can be used to * calculate spot partialities and Lorentz correction factors. **/ typedef enum { PMODEL_UNITY, /**< Set all partialities and Lorentz factors to 1. */ PMODEL_XSPHERE, /**< Flat sphere model with super-Gaussian spectrum */ PMODEL_OFFSET, /**< Ewald offset model for monochromatic beam */ PMODEL_RANDOM, /**< Randomly assigned partialities */ PMODEL_GGPM /**< Generalised gaussian prediction model */ } PartialityModel; /** Enumeration of parameters which may want to be refined */ enum gparam { GPARAM_ASX, GPARAM_ASY, GPARAM_ASZ, GPARAM_BSX, GPARAM_BSY, GPARAM_BSZ, GPARAM_CSX, GPARAM_CSY, GPARAM_CSZ, GPARAM_R, GPARAM_DIV, GPARAM_DETX, GPARAM_DETY, GPARAM_CLEN, GPARAM_OSF, /* Linear scale factor */ GPARAM_BFAC, /* D-W scale factor */ GPARAM_ANG1, /* Out of plane rotation angles of crystal */ GPARAM_ANG2, GPARAM_WAVELENGTH, GPARAM_EOL /* End of list */ }; /** * This structure represents the polarisation of the incident radiation */ struct polarisation { double fraction; /**< Polarisation fraction (0 to 1) */ double angle; /**< Angle of electron beam, radians, clockwise from * horizontal when looking along beam */ int disable; /**< If set, don't even correct for the polarisation * of the diffracted beam (1 - 0.5sin^2(2theta)) */ }; extern RefList *predict_to_res(Crystal *cryst, double max_res); extern void calculate_partialities(Crystal *cryst, PartialityModel pmodel); extern double r_gradient(UnitCell *cell, int k, Reflection *refl, struct image *image); extern void update_predictions(Crystal *cryst); extern struct polarisation parse_polarisation(const char *text); extern void polarisation_correction(RefList *list, UnitCell *cell, struct polarisation p); extern double sphere_fraction(double rlow, double rhigh, double pr); extern double gaussian_fraction(double rlow, double rhigh, double pr); extern double x_gradient(int param, Reflection *refl, UnitCell *cell, struct detgeom_panel *p); extern double y_gradient(int param, Reflection *refl, UnitCell *cell, struct detgeom_panel *p); #ifdef __cplusplus } #endif #endif /* GEOMETRY_H */