#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# Generate "peak powder" from CrystFEL stream
#
# Copyright © 2017-2020 Deutsches Elektronen-Synchrotron DESY,
#                       a research centre of the Helmholtz Association.
#
# Author:
#    2017 Alexandra Tolstikova <alexandra.tolstikova@desy.de>
#

import sys
import numpy as np
import h5py
from os.path import basename, splitext

if sys.argv[1] == '-':
    stream = sys.stdin
else:
    stream = open(sys.argv[1], 'r')

reading_geometry = False
reading_chunks = False
reading_peaks = False
max_fs = -100500
max_ss = -100500
for line in stream:
    if reading_chunks:
        if line.startswith('End of peak list'):
            reading_peaks = False
        elif line.startswith('  fs/px   ss/px (1/d)/nm^-1   Intensity  Panel'):
            reading_peaks = True
        elif reading_peaks:
            fs, ss, dump, intensity = [float(i) for i in line.split()[:4]]
            powder[int(ss), int(fs)] += intensity
    elif line.startswith('----- End geometry file -----'):
        reading_geometry = False
        powder = np.zeros((max_ss + 1, max_fs + 1))
    elif reading_geometry:
        try:
            par, val = line.split('=')
            if par.split('/')[-1].strip() == 'max_fs' and int(val) > max_fs:
                max_fs = int(val)
            elif par.split('/')[-1].strip() == 'max_ss' and int(val) > max_ss:
                max_ss = int(val)
        except ValueError:
            pass
    elif line.startswith('----- Begin geometry file -----'):
        reading_geometry = True
    elif line.startswith('----- Begin chunk -----'):
        reading_chunks = True

f = h5py.File(splitext(basename(sys.argv[1]))[0]+'-powder.h5', 'w')
f.create_dataset('/data/data', data=powder)
f.close()