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-rw-r--r--src/refine.c8
-rw-r--r--src/refinetest2d.c28
-rw-r--r--src/reproject.c10
3 files changed, 22 insertions, 24 deletions
diff --git a/src/refine.c b/src/refine.c
index 987fba1..5de8df3 100644
--- a/src/refine.c
+++ b/src/refine.c
@@ -33,10 +33,10 @@
#define DISPFACTOR 1.0e9
/* Number of parameters */
-#define NUM_PARAMS 4
+#define NUM_PARAMS 9
/* Refine debug */
-#define REFINE_DEBUG 1
+#define REFINE_DEBUG 0
/* A simplex is an array of ten of these */
typedef struct {
@@ -408,8 +408,6 @@ double refine_do_cell(ControlContext *ctx) {
d[f].dy = dly;
d[f].dz = dlz;
- printf("Feature %3i: %8f %8f %8f\n", f, dlx/DISPFACTOR, dly/DISPFACTOR, dlz/DISPFACTOR);
-
f++;
}
@@ -434,7 +432,7 @@ double refine_do_cell(ControlContext *ctx) {
memcpy(&s[9], &s[0], sizeof(SimplexVertex)); s[9].dcz = delta;
/* Iterate */
- maxiter = 5000;
+ maxiter = 500;
for ( it=0; it<maxiter; it++ ) {
double conv;
diff --git a/src/refinetest2d.c b/src/refinetest2d.c
index 03b65d6..cdc0c8d 100644
--- a/src/refinetest2d.c
+++ b/src/refinetest2d.c
@@ -30,17 +30,17 @@ static int check_cell(Basis *cell, Basis *cell_real) {
int fail;
-// printf(" Calculated Actual\n");
-// printf("---------------------------\n");
-// printf("ax %+8f %+8f\n", cell->a.x/1e9, cell_real->a.x/1e9);
-// printf("ay %+8f %+8f\n", cell->a.y/1e9, cell_real->a.y/1e9);
-// printf("az %+8f %+8f\n", cell->a.z/1e9, cell_real->a.z/1e9);
-// printf("bx %+8f %+8f\n", cell->b.x/1e9, cell_real->b.x/1e9);
-// printf("by %+8f %+8f\n", cell->b.y/1e9, cell_real->b.y/1e9);
-// printf("bz %+8f %+8f\n", cell->b.z/1e9, cell_real->b.z/1e9);
-// printf("cx %+8f %+8f\n", cell->c.x/1e9, cell_real->c.x/1e9);
-// printf("cy %+8f %+8f\n", cell->c.y/1e9, cell_real->c.y/1e9);
-// printf("cz %+8f %+8f\n", cell->c.z/1e9, cell_real->c.z/1e9);
+ printf(" Refinement Actual\n");
+ printf("---------------------------\n");
+ printf("ax %+8f %+8f\n", cell->a.x/1e9, cell_real->a.x/1e9);
+ printf("ay %+8f %+8f\n", cell->a.y/1e9, cell_real->a.y/1e9);
+ printf("az %+8f %+8f\n", cell->a.z/1e9, cell_real->a.z/1e9);
+ printf("bx %+8f %+8f\n", cell->b.x/1e9, cell_real->b.x/1e9);
+ printf("by %+8f %+8f\n", cell->b.y/1e9, cell_real->b.y/1e9);
+ printf("bz %+8f %+8f\n", cell->b.z/1e9, cell_real->b.z/1e9);
+ printf("cx %+8f %+8f\n", cell->c.x/1e9, cell_real->c.x/1e9);
+ printf("cy %+8f %+8f\n", cell->c.y/1e9, cell_real->c.y/1e9);
+ printf("cz %+8f %+8f\n", cell->c.z/1e9, cell_real->c.z/1e9);
fail = 0;
if ( fabs(cell->a.x - cell_real->a.x) > 0.01e9 ) {
@@ -107,7 +107,7 @@ int main(int argc, char *argv[]) {
ctx->x_centre = 256;
ctx->y_centre = 256;
ctx->pixel_size = 5e7;
- image_add(ctx->images, NULL, 512, 512, deg2rad(90.0), ctx);
+ image_add(ctx->images, NULL, 512, 512, deg2rad(0.0), ctx);
ctx->images->images[0].features = image_feature_list_new();
/* Fudge to avoid horrifying pointer-related death */
@@ -122,7 +122,7 @@ int main(int argc, char *argv[]) {
/* The "real" reflections */
reflections_real = reflection_list_from_cell(cell_real);
ctx->images->images[0].features = reproject_get_reflections(&ctx->images->images[0], reflections_real);
- printf("RT: %i test features generated.\n", ctx->images->images[0].features->n_features);
+// printf("RT: %i test features generated.\n", ctx->images->images[0].features->n_features);
/* The "model" cell to be refined */
ctx->cell = malloc(sizeof(Basis));
@@ -145,6 +145,8 @@ int main(int argc, char *argv[]) {
if ( fail ) return 1;
+ printf("\n2D refinement test OK.\n");
+
return 0;
}
diff --git a/src/reproject.c b/src/reproject.c
index 439c2f7..e1ce13e 100644
--- a/src/reproject.c
+++ b/src/reproject.c
@@ -85,7 +85,7 @@ ImageFeatureList *reproject_get_reflections(ImageRecord *image, ReflectionList *
double xl, yl, zl;
double a, b, c;
- double A1, A2, s1, s2, s, temp;
+ double A1, A2, s1, s2, s;
/* Get the coordinates of the reciprocal lattice point */
xl = reflection->x;
@@ -95,11 +95,9 @@ ImageFeatureList *reproject_get_reflections(ImageRecord *image, ReflectionList *
/* Next, solve the relrod equation to calculate the excitation error */
a = 1.0;
b = -2.0*(xl*nx + yl*ny + zl*nz);
- c = xl*xl + yl*yl + zl*zl - 1.0/(image->lambda*image->lambda); /* FIXME: Don't think this is stable */
- /* Solve the quadratic equation */
- temp = -0.5 * (b + sign(b)*sqrt(b*b - 4*a*c));
- A1 = temp / a;
- A2 = c / temp;
+ c = xl*xl + yl*yl + zl*zl - 1.0/(image->lambda*image->lambda);
+ A1 = (-b + sqrt(b*b-4.0*a*c))/(2.0*a);
+ A2 = (-b - sqrt(b*b-4.0*a*c))/(2.0*a);
s1 = 1.0/image->lambda - A1;
s2 = 1.0/image->lambda - A2;
if ( fabs(s1) < fabs(s2) ) s = s1; else s = s2;