diff options
Diffstat (limited to 'files/run-peaks.sh')
| -rw-r--r-- | files/run-peaks.sh | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/files/run-peaks.sh b/files/run-peaks.sh index 41d5248..dc8fe31 100644 --- a/files/run-peaks.sh +++ b/files/run-peaks.sh @@ -12,7 +12,7 @@ #module load crystallography/latest #export PATH=/install/bin:$PATH -source /gpfs/cfel/cxi/common/public/cfelsoft-rh7-public/conda-setup.sh -conda activate cfel_crystallography +module load maxwell miniconda3 +conda activate /gpfs/cfel/cxi/scratch/user/twhite/conda/envs/crystfel_dev indexamajig -i files.lst -o peaks.stream -j `nproc` -g 5HT2B-Liu-2013.geom --peaks=peakfinder8 --threshold=800 --min-pix-count=1 --min-snr=3 --indexing=none |