diff options
| author | Thomas White <taw@physics.org> | 2020-08-31 17:18:13 +0200 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2020-08-31 17:18:13 +0200 |
| commit | 4803fee7cb9e02251003bbbf20ecab7e41291d78 (patch) | |
| tree | 64025ec39cadfd83f3f815e0294a300e66bbe1b7 | |
| parent | ab5f4e3a29112fdd0a718bb33ddb8a20217cd443 (diff) | |
SLURM: Separate stderr and stdout files for each block
| -rw-r--r-- | src/gui_backend_slurm.c | 12 |
1 files changed, 10 insertions, 2 deletions
diff --git a/src/gui_backend_slurm.c b/src/gui_backend_slurm.c index 38ead6b1..92adc391 100644 --- a/src/gui_backend_slurm.c +++ b/src/gui_backend_slurm.c @@ -125,6 +125,8 @@ static uint32_t submit_batch_job(const char *geom_filename, int n_env, const char *job_name, const char *workdir, + const char *stderr_file, + const char *stdout_file, struct peak_params *peak_search_params, struct index_params *indexing_params) @@ -165,8 +167,8 @@ static uint32_t submit_batch_job(const char *geom_filename, job_desc_msg.min_nodes = 1; job_desc_msg.max_nodes = 1; job_desc_msg.name = strdup(job_name); - job_desc_msg.std_err = strdup("job.err"); - job_desc_msg.std_out = strdup("job.out"); + job_desc_msg.std_err = strdup(stderr_file); + job_desc_msg.std_out = strdup(stdout_file); job_desc_msg.work_dir = strdup(workdir); job_desc_msg.script = script; job_desc_msg.environment = env; @@ -298,12 +300,16 @@ static void *run_indexing(const char *job_title, char job_name[128]; char file_list[128]; char stream_filename[128]; + char stderr_file[128]; + char stdout_file[128]; int job_id; snprintf(job_name, 127, "%s-%i", job_title, i); snprintf(file_list, 127, "files-%i.lst", i); snprintf(stream_filename, 127, "crystfel-%i.stream", i); + snprintf(stderr_file, 127, "stderr-%i.log", i); + snprintf(stdout_file, 127, "stdout-%i.log", i); write_partial_file_list(workdir_file, file_list, i, opts->block_size, @@ -318,6 +324,8 @@ static void *run_indexing(const char *job_title, n_env, job_name, workdir, + stderr_file, + stdout_file, peak_search_params, indexing_params); |