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authorValerio Mariani <valerio.mariani@desy.de>2017-03-10 20:04:25 +0100
committerValerio Mariani <valerio.mariani@desy.de>2017-03-10 20:04:25 +0100
commitde2237fc3f193e4f4916e3bc9268e52378fad939 (patch)
treeb6df326f5c88009b627d31e15d4ee75977407d69 /libcrystfel
parent82dd26cfaf97d19da1f3d81f3e73bc13764d9899 (diff)
Fixed a couple of bugs reported by Tom
Diffstat (limited to 'libcrystfel')
-rw-r--r--libcrystfel/src/peakfinder8.c15
1 files changed, 9 insertions, 6 deletions
diff --git a/libcrystfel/src/peakfinder8.c b/libcrystfel/src/peakfinder8.c
index 2af8608a..c312e120 100644
--- a/libcrystfel/src/peakfinder8.c
+++ b/libcrystfel/src/peakfinder8.c
@@ -370,7 +370,7 @@ static int compute_radial_stats(float ** panel_data,
for ( it_counter=0 ; it_counter<iterations ; it_counter++ ) {
- for ( i=0; i<num_rad_bins; i++) {
+ for ( i=0; i<num_rad_bins; i++ ) {
roffset[i] = 0;
rsigma[i] = 0;
rcount[i] = 0;
@@ -380,14 +380,13 @@ static int compute_radial_stats(float ** panel_data,
int i;
- for ( i = 0; i < w[pi]*h[pi] ; i++) {
+ for ( i = 0; i < w[pi]*h[pi] ; i++ ) {
if ( masks[pi][i] != 0 ) {
curr_r = (int)rint(r_maps[pi][i]);
data = panel_data[pi][i];
-
if ( data < rthreshold[curr_r ] ) {
update_radial_stats(roffset,
@@ -563,6 +562,7 @@ static void peak_search(int p, int *inss, int *infs, int h, int w,
&& pix_in_peak_map[pi] == 0
&& mask[pi] != 0 ) {
+
curr_i = copy[pi] - roffset[curr_radius];
*sum_i += curr_i;
@@ -655,7 +655,8 @@ static void search_in_ring(int ring_width, int com_fs_int, int com_ss_int,
*local_sigma = sqrt(sum_i_squared / np_sigma -
((sum_i / np_sigma) * (sum_i / np_sigma)));
} else {
- local_radius = rint(r_map[lrint(com_idx)]);
+
+ local_radius = rint(r_map[(int)rint(com_idx)]);
*local_offset = roffset[local_radius];
*local_sigma = 0.01;
}
@@ -747,7 +748,7 @@ static int peakfinder8_multipanel(float *roffset, float *rthreshold,
idx = ifs+multip_w*iss;
- curr_radius = (int)r_map[idx];
+ curr_radius = (int)rint(r_map[idx]);
curr_threshold = rthreshold[curr_radius];
if ( copy[idx] > curr_threshold &&
@@ -762,7 +763,8 @@ static int peakfinder8_multipanel(float *roffset, float *rthreshold,
sum_com_fs = 0;
sum_com_ss = 0;
- do {
+ do {
+
lt_num_pix_in_pk = num_pix_in_peak;
for ( p=0; p<num_pix_in_peak; p++ ) {
@@ -791,6 +793,7 @@ static int peakfinder8_multipanel(float *roffset, float *rthreshold,
peak_com_fs = sum_com_fs / fabs(sum_i);
peak_com_ss = sum_com_ss / fabs(sum_i);
+
com_idx = rint(peak_com_fs) +
rint(peak_com_ss) * multip_w;