diff options
| author | Thomas White <taw@physics.org> | 2020-03-05 11:50:25 +0100 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2020-07-29 18:42:24 +0200 |
| commit | 6516cc6c948f8e907dbe3863ef5e4d3f16cb1ecd (patch) | |
| tree | 00c2ef372b60242e31e7de62fefdf14b5d74b7e9 /libcrystfel | |
| parent | 0fd4dad9b451d9ae09a016bd85363de49b75d393 (diff) | |
Convert peak detection to use detgeom
Diffstat (limited to 'libcrystfel')
| -rw-r--r-- | libcrystfel/src/peaks.c | 18 |
1 files changed, 7 insertions, 11 deletions
diff --git a/libcrystfel/src/peaks.c b/libcrystfel/src/peaks.c index cd2433a6..fa8b7c6e 100644 --- a/libcrystfel/src/peaks.c +++ b/libcrystfel/src/peaks.c @@ -55,7 +55,7 @@ #include "image.h" #include "utils.h" #include "peaks.h" -#include "detector.h" +#include "detgeom.h" #include "filters.h" #include "reflist-utils.h" #include "cell-utils.h" @@ -261,7 +261,7 @@ static void search_peaks_in_panel(struct image *image, float threshold, { int fs, ss, stride; float *data; - struct panel *p; + struct detgeom_panel *p; double d; int idx; double f_fs = 0.0; @@ -276,7 +276,7 @@ static void search_peaks_in_panel(struct image *image, float threshold, int nrej_sat = 0; int nacc = 0; - p = &image->det->panels[pn]; + p = &image->detgeom->panels[pn]; data = image->dp[pn]; stride = p->w; @@ -427,9 +427,7 @@ void search_peaks(struct image *image, float threshold, float min_sq_gradient, } image->features = image_feature_list_new(); - for ( i=0; i<image->det->n_panels; i++ ) { - - if ( image->det->panels[i].no_index ) continue; + for ( i=0; i<image->detgeom->n_panels; i++ ) { search_peaks_in_panel(image, threshold, min_sq_gradient, min_snr, i, ir_inn, ir_mid, ir_out, @@ -501,16 +499,14 @@ int search_peaks_peakfinder9(struct image *image, float min_snr_biggest_pix, if ( allocatePeakList(&peakList, NpeaksMax) ) return 1; - for ( panel_number=0; panel_number<image->det->n_panels; panel_number++ ) { + for ( panel_number=0; panel_number<image->detgeom->n_panels; panel_number++ ) { int w, h; int peak_number; detectorRawFormat_t det_size_one_panel; - if ( image->det->panels[panel_number].no_index ) continue; - - w = image->det->panels[panel_number].w; - h = image->det->panels[panel_number].h; + w = image->detgeom->panels[panel_number].w; + h = image->detgeom->panels[panel_number].h; det_size_one_panel.asic_nx = w; det_size_one_panel.asic_ny = h; |