diff options
| author | Thomas White <taw@physics.org> | 2017-05-13 12:04:47 +0200 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2017-06-21 14:26:02 +0200 |
| commit | 38c560f7fc99383883890d746e74bd774a0309c7 (patch) | |
| tree | 14deff6aab9832f8bcd00e90c28180e2d39d08a9 /src/indexamajig.c | |
| parent | 5e9137947df9330308e1f66fa4a0701481ba6e06 (diff) | |
indexamajig: Add --min-peaks (basic hitfinder functionality)
Diffstat (limited to 'src/indexamajig.c')
| -rw-r--r-- | src/indexamajig.c | 7 |
1 files changed, 7 insertions, 0 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c index 439f9be3..fec7fc39 100644 --- a/src/indexamajig.c +++ b/src/indexamajig.c @@ -124,6 +124,7 @@ static void show_help(const char *s) " --max-pix-count=<n> Only accept peaks if they include less than <n>\n" " pixels, in the Peakfinder8 algorithm.\n" " Default: 200.\n" +" --min-peaks=<n> Minimum number of peaks for indexing.\n" " --local-bg-radius=<n> Radius (in pixels) to use for the estimation of\n" " local background in the Peakfinder8 algorithm.\n" " Default: 3.\n" @@ -258,6 +259,7 @@ int main(int argc, char *argv[]) iargs.stream_refls = 1; iargs.int_diag = INTDIAG_NONE; iargs.copyme = new_imagefile_field_list(); + iargs.min_peaks = 0; if ( iargs.copyme == NULL ) { ERROR("Couldn't allocate HDF5 field list.\n"); return 1; @@ -337,6 +339,7 @@ int main(int argc, char *argv[]) {"local-bg-radius", 1, NULL, 28}, {"min-res", 1, NULL, 29}, {"max-res", 1, NULL, 30}, + {"min-peaks", 1, NULL, 31}, {0, 0, NULL, 0} }; @@ -540,6 +543,10 @@ int main(int argc, char *argv[]) iargs.max_res = atoi(optarg); break; + case 31: + iargs.min_peaks = atoi(optarg); + break; + case 0 : break; |