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authorThomas White <taw@physics.org>2017-09-17 10:54:19 +0200
committerThomas White <taw@physics.org>2017-09-17 10:54:19 +0200
commit683ba26884737f5d4b272b23ab890608dbbd6c9a (patch)
tree1284784c3f187f8fe7416bb3dc78aa3f4ed14890 /src/indexamajig.c
parentd09377870075ab13fab272d10f33be30309f2c72 (diff)
indexamajig: --help documentation for new indexing options
Diffstat (limited to 'src/indexamajig.c')
-rw-r--r--src/indexamajig.c8
1 files changed, 7 insertions, 1 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c
index 44b91338..d73cd002 100644
--- a/src/indexamajig.c
+++ b/src/indexamajig.c
@@ -148,6 +148,13 @@ static void show_help(const char *s)
" --copy-hdf5-field <f> Copy the value of field <f> into the stream. You\n"
" can use this option as many times as you need.\n"
"\n"
+"\nOverall control of the indexing process:\n\n"
+" --no-check-cell Don't check lattice parameters against input cell.\n"
+" --no-cell-combinations Don't use axis combinations when checking cell.\n"
+" --no-multi Don't repeat indexing to index multiple hits.\n"
+" --no-retry Don't repeat indexing to increase indexing rate.\n"
+" --no-refine Skip the prediction refinement step.\n"
+"\n"
"\nOptions for greater performance:\n\n"
" -j <n> Run <n> analyses in parallel. Default 1.\n"
" --temp-dir=<path> Put the temporary folder under <path>.\n"
@@ -163,7 +170,6 @@ static void show_help(const char *s)
" --no-non-hits-in-stream Do not include non-hit frames in the stream.\n"
" (see --min-peaks)\n"
" --int-diag=<cond> Show debugging information about reflections.\n"
-" --no-refine Skip the prediction refinement step.\n"
" --profile Show timing data for performance monitoring.\n"
" --no-half-pixel-shift Don't offset the HDF5 peak locations by 0.5 px.\n"
"\nLow-level options for the felix indexer:\n\n"