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authorThomas White <taw@physics.org>2011-03-16 11:15:23 +0100
committerThomas White <taw@physics.org>2012-02-22 15:27:20 +0100
commit2d4c3d1fbcc8a27dbb14cfcd26c5fadd48fb9e3c (patch)
treedf35fa93f1d5e7ae8610653c7743a877f0c120dc /src
parent1630a244cd07787b4e0865d93f422ab6cc557446 (diff)
cubeit: Use new stream format
Diffstat (limited to 'src')
-rw-r--r--src/cubeit.c27
1 files changed, 16 insertions, 11 deletions
diff --git a/src/cubeit.c b/src/cubeit.c
index 608f0e48..2fc41698 100644
--- a/src/cubeit.c
+++ b/src/cubeit.c
@@ -3,7 +3,7 @@
*
* "Full integration" of diffraction data
*
- * (c) 2006-2010 Thomas White <taw@physics.org>
+ * (c) 2006-2011 Thomas White <taw@physics.org>
*
* Part of CrystFEL - crystallography with a FEL
*
@@ -388,31 +388,36 @@ static void *get_image(void *qp)
{
struct sum_args *pargs;
struct queue_args *qargs = qp;
- UnitCell *cell;
- char *filename;
- double ph_ev;
+ struct image image;
/* Get the next filename */
- if ( find_chunk(qargs->fh, &cell, &filename, &ph_ev) ) {
+ if ( read_chunk(qargs->fh, &image) == 1 ) {
+ ERROR("Failed to read chunk from the input stream.\n");
return NULL;
}
+ /* Won't be needing these */
+ image_feature_list_free(image.features);
+ image.features = NULL;
+ reflist_free(image.reflections);
+
+
pargs = malloc(sizeof(struct sum_args));
if ( qargs->config_basename ) {
char *tmp;
- tmp = safe_basename(filename);
- free(filename);
- filename = tmp;
+ tmp = safe_basename(image.filename);
+ free(image.filename);
+ image.filename = tmp;
}
memcpy(&pargs->static_args, &qargs->static_args,
sizeof(struct static_sum_args));
- pargs->cell = cell;
+ pargs->cell = image.indexed_cell;
pargs->filename = malloc(1024);
- snprintf(pargs->filename, 1023, "%s%s", qargs->prefix, filename);
- free(filename);
+ snprintf(pargs->filename, 1023, "%s%s", qargs->prefix, image.filename);
+ free(image.filename);
return pargs;
}