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-rw-r--r--src/indexamajig.c1
1 files changed, 1 insertions, 0 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c
index 7861cffe..aa316caf 100644
--- a/src/indexamajig.c
+++ b/src/indexamajig.c
@@ -618,6 +618,7 @@ int main(int argc, char *argv[])
args.if_peaks = 1;
args.if_multi = 0;
args.if_retry = 1;
+ args.if_refine = 1;
args.if_checkcell = 1;
args.profile = 0;
args.taketwo_opts_ptr = &taketwo_opts;