diff options
Diffstat (limited to 'src/hdfsee.c')
| -rw-r--r-- | src/hdfsee.c | 17 |
1 files changed, 11 insertions, 6 deletions
diff --git a/src/hdfsee.c b/src/hdfsee.c index a1d16b56..ff74ead6 100644 --- a/src/hdfsee.c +++ b/src/hdfsee.c @@ -38,9 +38,11 @@ static void show_help(const char *s) " -p, --peak-overlay=<filename> Draw circles in positions listed in file.\n" " -i, --int-boost=<n> Multiply intensity by <n>.\n" " -b, --binning=<n> Set display binning to <n>.\n" -" --clean-image Perform common-mode noise subtraction and\n" -" background removal on images before\n" -" proceeding.\n" +" --filter-cm Perform common-mode noise subtraction.\n" +" --filter-noise Apply an aggressive noise filter which\n" +" sets all pixels in each 3x3 region to\n" +" zero if any of them have negative\n" +" values.\n" "\n"); } @@ -79,7 +81,8 @@ int main(int argc, char *argv[]) char *peaks = NULL; int boost = 1; int binning = 2; - int config_clean = 0; + int config_cmfilter = 0; + int config_noisefilter = 0; /* Long options */ const struct option longopts[] = { @@ -87,7 +90,8 @@ int main(int argc, char *argv[]) {"peak-overlay", 1, NULL, 'p'}, {"int-boost", 1, NULL, 'i'}, {"binning", 1, NULL, 'b'}, - {"clean-image", 0, &config_clean, 1}, + {"filter-cm", 0, &config_cmfilter, 1}, + {"filter-noise", 0, &config_noisefilter, 1}, {0, 0, NULL, 0} }; @@ -145,7 +149,8 @@ int main(int argc, char *argv[]) for ( i=0; i<nfiles; i++ ) { main_window_list[i] = displaywindow_open(argv[optind+i], peaks, boost, binning, - config_clean); + config_cmfilter, + config_noisefilter); if ( main_window_list[i] == NULL ) { ERROR("Couldn't open display window\n"); } else { |