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-rw-r--r--src/indexamajig.c21
1 files changed, 13 insertions, 8 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c
index d73cd002..ef6dbd42 100644
--- a/src/indexamajig.c
+++ b/src/indexamajig.c
@@ -235,8 +235,8 @@ int main(int argc, char *argv[])
int len;
char *command_line_peak_path = NULL;
int if_refine = 1;
- int if_comb = 1;
- int if_axes = 1;
+ int if_nocomb = 0;
+ int if_nocheck = 0;
int if_peaks = 0;
int if_multi = 1;
int if_retry = 1;
@@ -326,8 +326,9 @@ int main(int argc, char *argv[])
{"profile", 0, &iargs.profile, 1},
{"no-half-pixel-shift",0, &iargs.half_pixel_shift, 0},
{"no-refine", 0, &if_refine, 0},
- {"no-cell-combinations",0,&if_comb, 0},
- {"no-check-cell", 0, &if_axes, 0},
+ {"no-cell-combinations",0,&if_nocomb, 1},
+ {"no-check-cell", 0, &if_nocheck, 1},
+ {"no-cell-check", 0, &if_nocheck, 1},
{"check-peaks", 0, &if_peaks, 1},
{"no-retry", 0, &if_retry, 0},
{"no-multi", 0, &if_multi, 0},
@@ -874,13 +875,17 @@ int main(int argc, char *argv[])
IndexingFlags flags = 0;
- if ( if_axes ) {
+ if ( if_nocomb ) {
flags |= INDEXING_CHECK_CELL_AXES;
- }
- if ( if_comb ) {
+ } else {
flags |= INDEXING_CHECK_CELL_COMBINATIONS;
- flags &= ~INDEXING_CHECK_CELL_AXES; /* Not needed */
}
+
+ if ( if_nocheck ) {
+ flags &= ~INDEXING_CHECK_CELL_AXES;
+ flags &= ~INDEXING_CHECK_CELL_COMBINATIONS;
+ }
+
if ( if_refine ) {
flags |= INDEXING_REFINE;
}