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2019-09-23Merge branch 'tom/pinkindexer'Thomas White
2019-09-23indexamajig: Move 'profile' flag out of iargsThomas White
2019-09-23indexamajig: Restore --min-gradientThomas White
2019-09-20Add missing 'break'Thomas White
2019-09-20Delegate option processing for indexing methodsThomas White
Involves switching from getopt_long to argp. A big improvement!
2019-09-18Update ChangeLogThomas White
2019-09-17Add warning if reflections could not be integrated (e.g. due to overlap)Thomas White
2019-09-16Fix cell comparison logicThomas White
2019-09-13Remove check for gtk-docThomas White
2019-09-13Remove unused checksThomas White
Add them back in when they're actually used, of course
2019-09-12Fix sign of zl comparisonThomas White
2019-09-12Restore default bandwidth (if not specified in geometry file)Thomas White
2019-09-12Fix logicThomas White
2019-09-12indexamajig: Get rid of --fix-bandwidth / use bandwidth from geometry fileThomas White
2019-09-12Force --no-check-peaks and --no-refine if pinkIndexer is used, and add a warningThomas White
2019-09-12Increase indexing timeout when using pinkIndexerThomas White
2019-09-12Add indexing_methods() to examine the actual list of methodsThomas White
2019-09-12Remove message directing to old optionThomas White
2019-09-12Avoid duplication of beam and detector parameters for pinkIndexerThomas White
2019-09-12bug fix: asking for detector distance != 0 instad of beamBandwidth != 0Yaroslav Gevorkov
2019-09-12pinkIndexer: Remove debugging messagesThomas White
2019-09-12Accept --indexing=pinkindexer (lower case)Thomas White
2019-09-12Set task name for PinkIndexerThomas White
2019-09-12Fix header include pathThomas White
2019-09-12Format help items for pinkIndexerThomas White
2019-09-12Add GPL boilerplateThomas White
2019-09-12WhitespaceThomas White
2019-09-12pinkIndexer: Formatting, and get rid of tmp_enumThomas White
2019-09-12Use hard-coded default bandwidth for pinkIndexerThomas White
(Temporarily)
2019-09-12Use +INFINITY instead of FLT_MAXThomas White
2019-09-12Add pinkIndexer interfaceYaroslav Gevorkov
2019-09-12Fix possibly uninitialised overlap_integralThomas White
Introduced by b6af09d78d49d552a05b81bd20a7854a180373f5
2019-09-12Fix possibly uninitialised CiAMCBThomas White
2019-09-10indexamajig: Add --peaks=noneThomas White
2019-09-10sort_peaks(): Handle NULL peak listThomas White
2019-09-09turbo-index-slurm: Remove --workdir optionThomas White
In the latest version, it's been renamed to --chdir. But it's not necessary anyway. The default working directory is the sbatch caller's directory.
2019-09-06Use new peak check only when doing multi-lattice indexingThomas White
2019-09-06New check for indexing solutions (copied across from pinkIndexer)Thomas White
2019-09-05process_hkl: Set kpred for all reflections to image valueThomas White
Since the prediction calculation isn't called by process_hkl (in contrast to partialator), a value must still be provided.
2019-09-05partialator: Correct polarisation after update_predictions()Thomas White
Polarisation correction needs kpred values.
2019-09-05Allow the polarsation correction to be completely disabledThomas White
2019-09-03Fix memory leak in event queueThomas White
2019-09-03Fix memory leaks in cell comparisonThomas White
2019-09-03get_detector_geometry_from_string: Fix memory leaksThomas White
2019-09-02Add tests/polarisation_check (not in 'make test' list)Thomas White
2019-09-02indexamajig(1): Fix capitalisationThomas White
2019-09-02Don't need separate wavelength for polarisation correctionThomas White
Can use kpred
2019-09-02process_hkl,partialator: Allow arbitrary direction and degree of polarisationThomas White
2019-08-29compare_reindexed_cell_parameters: Increase number of possibilities in final ↵Thomas White
permutation check More than 5 possible when there are axes with similar lengths.
2019-08-29prediction_gradient_check: Reduce bandwidthThomas White
Gradients are only correct for monochromatic radiation
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