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2019-12-13pair_peaks: Don't attempt to pair 000Thomas White
Normally the beam centre is masked out or not on the detector. However, when it is, pairing with 000 causes gradients to come out as NaN and the prediction refinement to fail.
2019-11-18Fix documentationThomas White
2019-11-18PinkIndexer documentationYaroslav Gevorkov
2019-11-15get_hkl: Fix resolution cutoffThomas White
The units needed to be clarified.
2019-11-15Add partiality model GGPMWolfgang Brehm
2019-11-13fix long variable names in argp_optionYaroslav Gevorkov
2019-11-13rename "overriden" to "custom"Yaroslav Gevorkov
2019-11-13catch input errorYaroslav Gevorkov
2019-11-13add option --pinkIndexer-override-visible-energy-rangeYaroslav Gevorkov
2019-11-13Fix peak check logic for multiple crystalsThomas White
It seems that the code wasn't properly updated when multi-crystal indexing was introducted. This "continue" statement didn't do anything.
2019-11-13extract-geom: Fix newlineThomas White
2019-11-05bug fix for standard bandwidth in pinkIndexerYaroslav Gevorkov
2019-11-05bug fix in Ewald sphere width calculationYaroslav Gevorkov
2019-10-29add "override" beam options to pinkIndexerYaroslav Gevorkov
2019-10-29bug fix: rename peakFinder9 argumentYaroslav Gevorkov
2019-10-24get_hkl: Clean up resolution cutoffs and add --lowresThomas White
2019-10-24polarisation_correction: Use symmetric indicesThomas White
2019-10-24polarisation_correction: Scale the sigma as wellThomas White
2019-10-22xds: Fix handedness of unit cellThomas White
Previously, it was wired to give left handed cells.
2019-10-22Add more warningsThomas White
2019-10-22Add some warnings and assertionsThomas White
2019-10-22reduce_g6: Fix sign criterion for step 3Thomas White
2019-10-18indexamajig: Fix incorrect timeout logicThomas White
2019-10-17indexamajig: Shut down gracefully after failed image loadThomas White
2019-10-11Copy target cell's lattice type and unique axis into cell from indexing, ↵Thomas White
after comparison
2019-09-26Restore CMake stuff for PinkIndexerThomas White
See 3fe28041e where it was temporarily removed.
2019-09-25Add configuration check for argpThomas White
2019-09-25Update ChangeLogThomas White
2019-09-25tests/rational_check: Fix wrong bracketsThomas White
2019-09-23Add missing initialisationThomas White
2019-09-23indexamajig: Stop program on option parsing errorThomas White
2019-09-23Get rid of "rescut" integration flagThomas White
Its behaviour is 100% covered by the push-res parameter, which can be set to infinity for no cutoff.
2019-09-23Remove private option structures from iargsThomas White
2019-09-23Merge branch 'tom/pinkindexer'Thomas White
2019-09-23indexamajig: Move 'profile' flag out of iargsThomas White
2019-09-23indexamajig: Restore --min-gradientThomas White
2019-09-20Add missing 'break'Thomas White
2019-09-20Delegate option processing for indexing methodsThomas White
Involves switching from getopt_long to argp. A big improvement!
2019-09-18Update ChangeLogThomas White
2019-09-17Add warning if reflections could not be integrated (e.g. due to overlap)Thomas White
2019-09-16Fix cell comparison logicThomas White
2019-09-13Remove check for gtk-docThomas White
2019-09-13Remove unused checksThomas White
Add them back in when they're actually used, of course
2019-09-12Fix sign of zl comparisonThomas White
2019-09-12Restore default bandwidth (if not specified in geometry file)Thomas White
2019-09-12Fix logicThomas White
2019-09-12indexamajig: Get rid of --fix-bandwidth / use bandwidth from geometry fileThomas White
2019-09-12Force --no-check-peaks and --no-refine if pinkIndexer is used, and add a warningThomas White
2019-09-12Increase indexing timeout when using pinkIndexerThomas White
2019-09-12Add indexing_methods() to examine the actual list of methodsThomas White
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