| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2016-01-29 | felix: return the number of crystals | Thomas White | |
| 2016-01-29 | Use a fresh copy of the peak list for each new indexing method | Thomas White | |
| 2016-01-27 | asdf: Don't assume that the number of peaks == image_feature_count() | Thomas White | |
| Yes, really. Sorry about the crappy API. | |||
| 2016-01-16 | scripts/ave-resolution: Show histogram of resolution values | Thomas White | |
| 2016-01-15 | Use only the first two dimensions when using an external bad pixel mask or ↵ | Thomas White | |
| saturation map | |||
| 2016-01-15 | Set indexing -nomulti as the default, and add a warning | Thomas White | |
| 2016-01-13 | Fix logic for -retry and -multi | Thomas White | |
| 2016-01-08 | Make indexing "retry" and "multi" optional | Thomas White | |
| 2016-01-08 | ambigator: Don't require -y | Thomas White | |
| The manual says that -y 1 is the default. | |||
| 2016-01-08 | Replace incorrect label in geoptimiser | Valerio Mariani | |
| 2016-01-06 | Rearrange columns in partialator.params | Thomas White | |
| 2016-01-06 | Print filename and event string in the partialator.params output file | Valerio Mariani | |
| 2016-01-06 | search_peaks_in_panel(): Fix iteration bounds (again) | Thomas White | |
| 2015-12-18 | Saturation map fixes | Thomas White | |
| 2015-12-18 | Allow peak check to pass just by accounting for more than 5 peaks | Thomas White | |
| The "old" criterion is still allowed for a pass, but would filter out multi-lattice hits. | |||
| 2015-12-18 | "Retry" mechanism for indexing | Thomas White | |
| This increases the indexing rate a bit in situations where there are lots of weak peaks which, although they may be real, don't help indexing. The weakest 10% of peaks get cut out and the indexing re-run. This also allows multiple hits to be indexed, using the "inelegant peak subtraction method", by retrying indexing in the same way after deleting peaks which are accounted for by the lattice just found. | |||
| 2015-12-17 | hdfsee: Update docs | Thomas White | |
| 2015-12-17 | list_events: Handle broken event list | Thomas White | |
| 2015-12-17 | Clean up unused code | Thomas White | |
| 2015-12-15 | Update paper reference in geoptimiser man page | Thomas White | |
| 2015-12-13 | indexamajig: Restart fgets() in pump_chunk() if interrupted by system call | Thomas White | |
| This fixes the occasional unterminated chunk found in the output. | |||
| 2015-12-10 | Fix integration tests for new saturation map | Thomas White | |
| 2015-12-05 | Add option for per-pixel saturation values | Thomas White | |
| 2015-12-03 | scripts/turbo-index: Add missing "done" | Thomas White | |
| 2015-12-01 | hdfsee: Round panel transformations before passing them to Cairo | Thomas White | |
| This prevents the slight blurring of image data which happened before. | |||
| 2015-11-27 | Fix documentation | Thomas White | |
| 2015-11-27 | indexamajig: Write target unit cell into stream | Thomas White | |
| 2015-11-19 | Maximum number of iterations for scaling | Thomas White | |
| 2015-11-19 | partialator: Set default push-res to infinity | Thomas White | |
| Not needed now that the scaling is more stable | |||
| 2015-11-19 | Monitor average B | Thomas White | |
| 2015-11-19 | Count reflections in merge and scaling | Thomas White | |
| 2015-11-18 | Move B factor limit to general rejection function | Thomas White | |
| 2015-11-18 | No free-flagged reflections in merge for scaling | Thomas White | |
| 2015-11-18 | Factorise get_locked_reflection() | Thomas White | |
| 2015-11-18 | partialator: Scale (strictly) using strong reflections only | Thomas White | |
| 2015-11-18 | merge_intensities(): add use_weak option | Thomas White | |
| 2015-11-18 | Documentation fixes | Thomas White | |
| 2015-11-17 | Update docs | Thomas White | |
| 2015-11-17 | Add a warning | Thomas White | |
| 2015-11-17 | Make integration WITHOUT gradient background the default | Thomas White | |
| 2015-11-17 | Make gradient background fitting optional | Thomas White | |
| 2015-11-13 | Fussiness (extreme) | Thomas White | |
| 2015-11-13 | Avoid NULL dereference in some scenarios when there is no bad pixel mask | Thomas White | |
| 2015-11-13 | Fussiness/add a FIXME | Thomas White | |
| 2015-11-13 | Fix bug in process_hkl documentation | Thomas White | |
| 2015-11-10 | Improve single_panel_data_source() | Thomas White | |
| Fixes two problems: 1. Copious memory leaks via strdup() 2. Hardcoded default /data/data, not used anywhere else | |||
| 2015-11-10 | Remove old code | Thomas White | |
| 2015-11-10 | Fix hardcoded maximum gradient for integration | Thomas White | |
| 2015-11-06 | Remove unused definition | Thomas White | |
| 2015-11-06 | Fix iteration bounds for peak search | Thomas White | |
| It was out by one because of some leftover characters from the previous version. | |||
 |
index : CrystFEL | |
| Data processing for serial crystallography | Thomas White |
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