CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2012-02-22	get_hkl: Add multiplicity and no-phases options	Thomas White

2012-02-22	Placeholder sigma(I)	Thomas White

2012-02-22	compare_hkl: Rename FoMs	Thomas White

2012-02-22	Add no_index option to detector geometry	Thomas White

2012-02-22	Update peak detection for new data	Thomas White
	- Remove in_streak() - handled by bad regions and preprocessing - Alter threshold
2012-02-22	Fix colour scale (negative values go at the bottom of the scale)	Thomas White

2012-02-22	indexamajig: Avoid re-counting images when the threads are joined	Thomas White

2012-02-22	indexamajig: Don't even try to load the cell if it's not needed	Thomas White

2012-02-22	indexamajig: Unit cell is not needed with --no-match	Thomas White

2012-02-22	Improve scripts/create-mtz	Thomas White

2012-02-22	Add scripts/zone-axes for rendering multiple zone axes with render_hkl	Thomas White

2012-02-22	Add facetron program for profile fitting and post-refinement	Thomas White

2012-02-22	Fussiness	Thomas White

2012-02-22	render_hkl: Remove code which has no reason to exist	Thomas White

2012-02-22	render_hkl: Take output filename on command line	Thomas White

2012-02-22	render_hkl: Separation does not depend on theta	Thomas White

2012-02-22	render_hkl: Simplify and fix	Thomas White

2012-02-22	render_hkl: Lengthen indexing lines a bit	Thomas White

2012-02-22	render_hkl: Remove stupid unnecessary iteration	Thomas White

2012-02-22	render_hkl: Specify axes on command line	Thomas White

2012-02-22	render_hkl: Centre properly (kind of)	Thomas White

2012-02-22	render_hkl: Add overlining for indices	Thomas White

2012-02-22	Add comment	Thomas White

2012-02-22	render_hkl: Fix arbitrary zone axes	Thomas White

2012-02-22	render_hkl: Allow other zone axes	Thomas White

2012-02-22	indexamajig: Fix uninitialised things	Thomas White

2012-02-22	render_hkl: Alter POV-ray scripting to work better with new data	Thomas White

2012-02-22	Update twin-calculator.{odt,pdf}	Thomas White

2012-02-22	process_hkl: Don't resolve twins/inversion unless requested	Thomas White

2012-02-22	render_hkl: Complain if there are no reflections	Thomas White

2012-02-22	render_hkl: Don't divide by counts	Thomas White

2012-02-22	process_hkl: Don't set counts to 1	Thomas White

2012-02-22	render_hkl: Get rid of debug message	Thomas White

2012-02-22	compare_hkl: Fix segfault	Thomas White

2012-02-22	process_hkl: Don't divide by counts for --max-only	Thomas White

2012-02-22	process_hkl: Fix merging so that it works	Thomas White

2012-02-22	compare_hkl: Take symmetry into account	Thomas White

2012-02-22	Twin law idiot check	Thomas White

2012-02-22	Fix holohedral point group for -1	Thomas White

2012-02-22	Fix to previous commit	Thomas White

2012-02-22	compare_hkl: Add symmetry option (not implemented yet)	Thomas White

2012-02-22	get_hkl: Do twinning with proper regard to group theory and stuff	Thomas White

2012-02-22	Alter column widths in symmetry table	Thomas White

2012-02-22	Add doc/twin-calculator.pdf (symmetry classification for serial crystallography)	Thomas White

2012-02-22	Fix arithmetic problem with colour scale	Thomas White

2012-02-22	get_hkl: Add comment	Thomas White

2012-02-22	render_hkl: Add --colour-key option, shuffle help message around	Thomas White

2012-02-22	Fix scale factors	Thomas White

2012-02-22	Reduce the scope of "count"	Thomas White
	Lists of counts had pervaded every corner of CrystFEL, being used as markers for the presence of reflections. Now we have a better way of doing this, the ReflItemList, and few parts of the suite apart from process_hkl have any business knowing how many observations were made of a particular reflection.
2012-02-22	process_hkl: Restructure and remove all intensity analysis stuff	Thomas White