CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2017-12-12	indexamajig: Rename --serial-offset to --serial-start	Thomas White
	Because "offset" sounds like it will add the argument to the serial numbers, i.e. --serial-offset=500 would start at 501. Actually, you just give the first serial number you'd like.
2017-12-12	indexamajig: Add --serial-offset	Thomas White

2017-12-12	check_hkl: Check for limiting top bin case	Thomas White

2017-12-07	scripts/truncate_stream: Accept input on stdin	Thomas White

2017-11-28	Fix check for cell parameters at start	Thomas White

2017-11-23	Avoid truncation with snprintf	Thomas White
	Just something that came from new compiler warnings after upgrading my system.
2017-11-23	Fix wrong assertion	Thomas White
	Whoops.
2017-11-23	scripts/peakogram-stream: Show "predicted reflections" instead of "peaks"	Thomas White

2017-11-15	Use GDK_a/b instead of GDK_KEY_a/b	Thomas White
	Some people using old libraries out there.
2017-11-14	hdfsee: Use a/b keys to change ring size	Thomas White

2017-11-14	scripts/peakogram-stream: Change status message to avoid confusion	Thomas White
	It uses predicted reflections, not found peaks
2017-11-14	scripts/peakogram-stream: Handle "-" for input	Thomas White

2017-11-14	scripts/detector-shift: Handle "-" for input	Thomas White

2017-10-27	Fix Felix tth options typo.	Kenneth R. Beyerlein

2017-10-27	Merge branch 'tom/simpler_felix'	Thomas White

2017-10-23	Check return values from fread/fgets	Thomas White

2017-10-23	configure.ac: Print a message about CBFlib	Thomas White
	Because this seems to be confusing people.
2017-10-23	configure.ac: Improve HDF5 detection	Thomas White

2017-10-19	peakogram-stream: Fix list indices for beta and gamma angles	Thomas White
	Whoops!
2017-10-19	peakogram-stream: Fix included peaks	Thomas White
	The min and max values are specified inclusively.
2017-10-19	peakogram-stream: Show the line and cell parameters when the maths goes wrong	Thomas White

2017-10-19	partial_sim: Write the symmetry to the reflection list	Thomas White

2017-10-19	partial_sim: Show the symmetry of the reflection list	Thomas White

2017-10-19	partial_sim: Use symmetry from file	Thomas White

2017-10-19	pattern_sim: Show the symmetry of the reflection list	Thomas White

2017-10-19	pattern_sim: Use symmetry from file	Thomas White

2017-10-19	get_hkl: Use symmetry from file	Thomas White

2017-10-19	compare_hkl: Use symmetry from file	Thomas White

2017-10-19	check_hkl: Use symmetry from file	Thomas White

2017-10-19	render_hkl: Use symmetry from file	Thomas White

2017-10-19	Add read_reflections_2() to API	Thomas White
	New version for reading the symmetry as well
2017-10-19	Remove read_reflections_from_file() from API	Thomas White
	See c0ce8fb4 for the rationale behind this.
2017-10-19	Add probe for TakeTwo	Thomas White

2017-10-18	move-entire-detector: Fix output filename	Thomas White

2017-10-18	New version of sum-peaks	Thomas White
	This version gets the array dimensions automatically. However, it still assumes the data is "slabby".
2017-10-18	Check that dirax,felix,mosflm or xds are available at the start	Thomas White
	Avoids a confusing error message later.
2017-10-18	indexamajig: Auto-detection of available indexing methods	Thomas White

2017-10-18	Add probe functions to indexing methods	Thomas White

2017-10-17	Handle old indexing methods	Thomas White
	There are limits to how well they can be handled, but this avoids screwing users over too much.
2017-10-17	felix: Set nsigmas=1	Thomas White

2017-10-12	indexamajig: Simplify Felix options	Thomas White

2017-10-12	Remove write_reflections_to_file() from API	Thomas White
	It's there because it used to be used to write the reflections into the stream. Therefore there was a need for a function to write a bare list of reflections to a file, with no headers. Since then, the stream and merged reflection file formats have diverged, so there's no use for this other than to confuse people.
2017-10-12	hdfsee: Add "peaks", "preds" or "rings" to export filename, as applicable	Thomas White

2017-10-12	hdfsee: Add event ID to exported image filename	Thomas White

2017-10-09	indexer_str(): Don't return "none-nolatt-nocell"	Thomas White

2017-10-09	configure.ac: Fix CBFlib path variable name	Thomas White
	Whoops.
2017-10-02	indexamajig: Tidy up --help	Thomas White

2017-10-02	indexamajig(1): Add --temp-dir	Thomas White

2017-10-02	Formatting fussiness	Thomas White

2017-10-02	indexamajig: Add missing documentation for --check-peaks	Thomas White