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2019-05-29Spectrum generationThomas White
2019-05-29Normalise sampled spectrum weights to total 1Thomas White
2019-05-29Remove old debugging statementThomas White
2019-05-29Use Spectrum API for simulationThomas White
2019-05-17s/histogram/pdf/Thomas White
2019-05-15Spectrum API clarificationsThomas White
2019-05-15Complete implementation of Spectrum APIThomas White
2019-05-14Start implementing Spectrum APIThomas White
2019-05-14Update Spectrum APIThomas White
2019-05-14Sketch out Spectrum APIThomas White
2019-05-14Update coding standardsThomas White
2019-05-14Remove image.num_peaks and num_saturated_peaksThomas White
These values were inconsistently set by different parts of the code, e.g. different peak search methods. num_saturated_peaks was even set during final integration. Now, the peak count is taken from the ImageFeatureList, so it's authoritative.
2019-05-14Move Histogram out of APIThomas White
It's only used by two test programs
2019-05-14Add documentation for search_peaks_peakfinder8Thomas White
2019-05-14Remove old "statistics" module with R factors etcThomas White
compare_hkl does all of these, much better than these functions.
2019-05-14Remove "valid" item from "struct imagefeature"Thomas White
2019-05-14gpu_sim_check: Increase tolerance from 1% to 1.1%Thomas White
1.03% deviation was observed in the wild, with no apparent problems.
2019-05-13FussinessThomas White
2019-05-13gpu_sim_check: Succeed if GPU not availableThomas White
On recent OSes, OpenCL (the API) is always available, but a GPU device not always. Therefore, this test will always be built, and shouldn't fail just because a GPU isn't present.
2019-05-08check_hkl: Report overall completeness and redundancyThomas White
2019-05-08check_hkl: Use unsigned long for reflection countsThomas White
2019-05-08Add missing =nThomas White
2019-05-08FormattingThomas White
2019-05-08Remove unused codeYaroslav Gevorkov
2019-05-08Add new xgandalf optionsYaroslav Gevorkov
2019-05-07Don't try to build API docs unless DOXYGEN_FOUNDThomas White
2019-05-07Merge branch 'tom/doxygen'Thomas White
2019-05-07Remove intmat_set_all_3x3()Thomas White
2019-05-07Add CrystFEL version (including API revision) directly into Doxygen main pageThomas White
2019-05-07Update all source code comments to Doxygen formatThomas White
2019-05-07Main and coding standard pagesThomas White
2019-05-07Add CMake stuff for DoxygenThomas White
2019-05-07Remove old documentation stuffThomas White
2019-05-07Move spectrum type enum to pattern_sim.cThomas White
2019-04-16Clean up residual CBFlib stuffThomas White
2019-04-16Recognise (if not handle) all CBF formatsThomas White
2019-04-16Basic CBF reader with byte offset decompressionThomas White
2019-04-15Strip ouf CBFlib referencesThomas White
2019-04-12move-entire-detector: Add z directionThomas White
2019-04-10cell_explorer: Exclude cells when centering type is set to greyThomas White
This is more useful than just changing the colours. Fixes CRYS-224.
2019-04-09cell_explorer: Initialise scd.enforced_cell to NULLThomas White
2019-04-05compare_reindexed_cell_parameters: Require lattice to be primitive unless ↵Thomas White
csl set
2019-04-05cell_tool: Add --cslThomas White
2019-04-05cell_explorer: Add enforcement of lattice type restrictions on cell parametersThomas White
2019-04-04cell_explorer: Remove accelerator from "Save histogram data" menu itemThomas White
2019-04-03Fix typoThomas White
2019-04-03cell_explorer: Complain about unknown centeringThomas White
2019-04-03hdfsee: Fix crash with no geometry fileThomas White
2019-04-03Consider pixel as bad if its value is NaN or infinityThomas White
2019-04-02compare_reindexed_cell_parameters: Bail out when there are no candidate vectorsThomas White
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