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2017-03-08Add SLURM version of turbo-index scriptThomas White
2017-03-08Add example Eiger geometry fileThomas White
2017-03-03cell_explorer: Better handling of dodgy cellsThomas White
2017-03-03Return error code if cell can't be invertedThomas White
2017-03-03partialator: Better handling of very small number of crystalsThomas White
2017-03-03geoptimiser: Call g_type_init() only if GLib is oldThomas White
2017-02-24get_hkl: Fix a segfault when there are no notesThomas White
2017-02-17Update docs (add funding acknowledgements)Thomas White
2017-02-16Fix mask path placeholder checkThomas White
The mask paths for all panels have to have the same number of placeholders, but the masks do not have to have the same number of placeholders as the panel data blocks. This also tidies up a few excess strdup() calls, and removes partial_event_substitution() because retrieve_full_path() can now handle the number of placeholders being too small.
2017-02-02Merge branch 'master' into taketwoThomas White
2017-02-02Cannot use stamp_response() hereThomas White
We have a pipe index (0 to n_read), not a process index (0 to n_proc). These are two separate lists, with no correspondence between them. See 7dbbfa4 for another fix related to this issue.
2017-02-02indexamajig: Add ping mechanism to avoid timing out when trying lots of indexersThomas White
2017-02-02cell_explorer: Fix labels once and for allThomas White
2017-02-01asdf.c: Divide volume constraints by number of lattice points per unit cell. ↵Alexandra Tolstikova
Add F centering
2017-02-01asdf.c: Divide volume constraints by number of lattice points per unit cell ↵Alexandra Tolstikova
since asdf always finds primitive cell
2017-02-01Fix malloc fail due to integer overflow in N_tripletsAlexandra Tolstikova
2017-02-01Change volume_min, volume_max and d_max when indexing=asdf-combAlexandra Tolstikova
2017-02-01Change d_max according to the provided cellAlexandra Tolstikova
2017-02-01partialator: Exit if point group is unrecognisedThomas White
2017-01-18Remove error messagesHelen Ginn
2017-01-18One image has no more leaks from taketwo.cHelen Ginn
2017-01-18Significant reduction in leakage, not done yet.Helen Ginn
2017-01-18Fixed more memory errorsHelen Ginn
2017-01-18Goodbye memory leaks!Helen Ginn
2017-01-18Fiddled with parameters, now nice for CPV17. Fixed a ton of bugs tooHelen Ginn
2017-01-17Random indentation plus faffing with parameters.Helen Ginn
2017-01-17Removed all debug messages, nice and clean.Helen Ginn
2017-01-17General beginning of tidying and removing some debug statements and return ↵Helen Ginn
best solution if they're all too rubbish to hit the threshold - not tested
2017-01-17Fiddles with parameters - more sensible nowHelen Ginn
2017-01-17Fiddle with parameter - temporaryHelen Ginn
2017-01-17Remove flip required for cppxfel coordinate systemHelen Ginn
2017-01-17Add rlp retrieval from peak list and tidy up the output to the screen a tadHelen Ginn
2017-01-17Committing all newest antics which DOES produce a decent solution for a ↵Helen Ginn
decent peak list...
2017-01-12indexamajig: Fix hanging on "Waiting for last patterns"Thomas White
2016-12-13Fix tests for new polarisation correctionThomas White
Actually, disable the polarisation correction in the tests.
2016-12-09New polarisation correctionThomas White
2016-11-25Display line numbers at which stream is corruptedThomas White
2016-11-24partialator: Fix counting of imagesThomas White
2016-11-16partialator: Fix segfault when not using --custom-splitThomas White
Crash introduced by 775bbc2d. How silly of me. Thanks to Ken Beyerlein for fixing this.
2016-11-11FussinessHelen Ginn
2016-11-11Send all possible seeds through the seed-starterHelen Ginn
2016-11-11Find potential matches between observed and simulated vectors now returns a ↵Helen Ginn
list, not a single match, in preparation for being more thorough searching
2016-11-10Fix 2theta calculation in locate_peak_on_panel()Thomas White
The "improved" version of this, added by 9b1374999 along with the new spot position calculation for out-of-plane panels, actually assumes that the reflection is at the exact Bragg condition. This is not a valid assumption here. The difference is small (<0.5 px), but made the prediction refinement gradients completely wrong.
2016-11-07render_hkl: Show max value, and improve documentation for --scale-topThomas White
2016-11-04Add (more) warnings about unique axesThomas White
2016-11-04Fixes the bug I discovered in Hamburg - closest_rot_mat needs to check whetherHelen Ginn
the theta angle is the minimum or maximum angle or whether to add Pi.
2016-10-28partialator: Show some useful numbers about csplit datasetsThomas White
2016-10-28partialator: Don't write a dataset if it contains no crystalsThomas White
2016-10-25TEMPORARY horrible debugging stuffThomas White
2016-10-25j_idxThomas White