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2019-03-11cell_tool: Add --compare (doesn't seem to work yet for some reason)Thomas White
2019-03-11Fix tolerancesThomas White
2019-03-11cell_tool: Improve option processingThomas White
2019-03-11Show the actual number of ordersThomas White
2019-03-11cell_tool: Use libcrystfel cells_are_similar() functionThomas White
2019-03-11cell_tool: Add --ringsThomas White
2019-03-11cell_tool --uncenter: Write unit cell to fileThomas White
2019-03-11cell_tool: Add --uncenterThomas White
2019-03-11Initial cell_tool (implementing find_ambi only)Thomas White
2019-03-07indexamajig: Status message improvementsThomas White
1. Show the number of hits 2. Keep producing updates while the last patterns are being processed 3. Don't duplicate the code for displaying the status messages
2019-03-07Remove old debug messageThomas White
2019-03-06indexamajig: Rename --min-gradient to --min-squared-gradientThomas White
The eventual aim of this is to deprecate the "--min-gradient" option, resolving the long-standing confusion about whether this option is the gradient or the squared gradient.
2019-03-06turbo-index-slurm: Comment out --nice valueThomas White
It's not needed as long as the queue implements proper fair sharing between users.
2019-03-05check-{near-bragg,peak-detection}: Give better errorsThomas White
2019-03-01partialator: Fix two small memory leaksThomas White
2019-03-01partialator: Check for failed minimiser setup in write_grid()Thomas White
2019-03-01partialator: Fix string overruns in write_grid()Thomas White
2019-03-01crystal_copy(): Make new copy of notes if non-NULLThomas White
2019-03-01partialator: Avoid double-free of stuff_from_stream and filenameThomas White
2019-03-01Don't mask out entire image if bad pixel map can't be loadedThomas White
2019-02-08scripts/plot-contourmap: Specify colours of contour linesThomas White
2019-02-08Add a comment to CMakeLists.txtThomas White
2019-01-30Make sure of string length in get_event_string()Thomas White
2019-01-30Set CMP0074 to "new"Thomas White
Allows -DHDF5_ROOT
2019-01-30Simplify fill_queue()Thomas White
2019-01-30Fixes for get_pattern()Thomas White
2019-01-30Fix read_prefixed_filename()Thomas White
2019-01-30Re-write get_event_string()Thomas White
2019-01-29Remove debugging messageThomas White
2019-01-29Fix some compiler warnings about string handlingThomas White
2019-01-29Fix a couple of memory leaksThomas White
2019-01-29Tidy up no_moreThomas White
2019-01-29Improvements to get_pattern()Thomas White
2019-01-29DS9K compatibilityThomas White
2019-01-29Add multi_event_geometry() functionThomas White
2019-01-29hdfsee: Fix possible string truncationThomas White
2019-01-29Strip out CPU affinity stuffThomas White
This was from an early experiment when we were having performance problems on a big NUMA machine. It didn't help very much back then, and it certainly doesn't help much now. It's not worth maintaining the code or build system needed for this.
2019-01-28partialator: Display error message if minimiser can't be set upThomas White
2019-01-28partialator: Fix incorrect free(audit_info)Thomas White
2019-01-28partialator: Catch failure to set up post-refinement minimiserThomas White
2019-01-28Remove #define _GNU_SOURCEThomas White
2019-01-28partialator: Fix multiple memory leaksThomas White
2019-01-28partialator: Fix a small typoThomas White
2019-01-24Say what path was being opened when event enumeration failsThomas White
2019-01-22TakeTwo: fix various memory leaksThomas White
2019-01-22Fix some small memory leaksThomas White
2019-01-14clock_gettime isn't needed for libcrystfelThomas White
2019-01-03Use gzclose() instead of gzclose_r()Thomas White
The only downside to this is that the zlib library will be twice the size if statically linked into libcrystfel. Since we don't anticipate much use for static linking, and since the extra space is unlikely to be a serious problem anyway, this seems fine.
2019-01-03Check for -fdiagnostics-color before using itThomas White
Needed for old gcc versions
2019-01-03indexamajig: Return non-zero exit status if no patterns were processedThomas White
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