Age | Commit message (Collapse) | Author | |
---|---|---|---|
2017-10-19 | Add read_reflections_2() to API | Thomas White | |
New version for reading the symmetry as well | |||
2017-10-19 | Remove read_reflections_from_file() from API | Thomas White | |
See c0ce8fb4 for the rationale behind this. | |||
2017-10-12 | Remove write_reflections_to_file() from API | Thomas White | |
It's there because it used to be used to write the reflections into the stream. Therefore there was a need for a function to write a bare list of reflections to a file, with no headers. Since then, the stream and merged reflection file formats have diverged, so there's no use for this other than to confuse people. | |||
2017-10-02 | indexamajig(1): Add --temp-dir | Thomas White | |
2017-10-02 | indexamajig: Add missing documentation for --check-peaks | Thomas White | |
2017-09-21 | Group the options in indexamajig(1) according to processing stage | Thomas White | |
2017-09-21 | Update man page for new indexing options | Thomas White | |
2017-09-15 | hdfsee(1): Document --rigid-groups | Thomas White | |
2017-07-24 | This is CrystFEL 0.6.30.6.3 | Thomas White | |
2017-07-24 | Update docs | Thomas White | |
2017-07-20 | indexamajig(1): Give default values for TakeTwo options | Thomas White | |
2017-07-07 | Documentation for TakeTwo indexamajig options | Thomas White | |
2017-07-05 | Update docs | Thomas White | |
2017-07-05 | Rearrange quaternion declarations so that gtk-doc can cope | Thomas White | |
The utils file contains two gtk-doc sections, "utils" and "quaternion", with a change of section halfway through. It seems that gtk-doc doesn't like it if the declarations are all mixed together. | |||
2017-06-27 | indexamajig: Add --no-non-hits-in-stream | Thomas White | |
2017-03-31 | Offset peak locations from HDF5 or CXI files by 0.5,0.5 | Thomas White | |
CrystFEL considers all peak locations to be distances from the corner of the detector panel, in pixel units, consistent with its description of detector geometry. In contrast, Cheetah considers the peak locations to be pixel indices in the data array. Therefore, a half-pixel offset is needed when importing the peak lists. For users who need the old behaviour, this commit adds a new option indexamajig --no-half-pixel-shift to deactivate this offset. | |||
2017-03-24 | Merge branch 'valerio/peakfinder8' | Thomas White | |
2017-03-13 | Added information about max_num_peaks to documentation | Valerio Mariani | |
2017-03-10 | Added peakfinder8 information to the indexamajig man page | Valerio Mariani | |
2017-03-08 | compare_hkl: Fix combination of sigma(I) values for d1sig and d2sig | Thomas White | |
2017-03-08 | compare_hkl: Fix documentation | Thomas White | |
2017-03-08 | Add example Eiger geometry file | Thomas White | |
2017-02-17 | Update docs (add funding acknowledgements) | Thomas White | |
2016-11-07 | render_hkl: Show max value, and improve documentation for --scale-top | Thomas White | |
2016-08-11 | Take rail direction as a vector rather than individual x,y,z values | Thomas White | |
Just to make it more consistent with fs/ss directions | |||
2016-08-10 | Allow peak table location to be given in geometry file | Thomas White | |
2016-08-09 | Update manual | Thomas White | |
2016-04-12 | Merge branch 'tom/testing' | Thomas White | |
2016-04-01 | Add adu_per_photon (distinct from adu_per_eV) | Thomas White | |
2016-03-31 | Handle placeholders in --hdf5-peaks | Thomas White | |
2016-03-21 | This is CrystFEL 0.6.20.6.2 | Thomas White | |
2016-03-18 | Update docs | Thomas White | |
2016-03-18 | Update docs | Thomas White | |
2016-03-01 | indexamajig: Wall clock profiling | Thomas White | |
2016-02-12 | Update manual | Thomas White | |
2016-02-05 | Update docs | Thomas White | |
2016-01-08 | Make indexing "retry" and "multi" optional | Thomas White | |
2015-12-17 | hdfsee: Update docs | Thomas White | |
2015-12-15 | Update paper reference in geoptimiser man page | Thomas White | |
2015-11-19 | partialator: Set default push-res to infinity | Thomas White | |
Not needed now that the scaling is more stable | |||
2015-11-18 | Documentation fixes | Thomas White | |
2015-11-17 | Update docs | Thomas White | |
2015-11-13 | Fix bug in process_hkl documentation | Thomas White | |
2015-10-27 | Update docs for pattern_sim | Thomas White | |
2015-09-16 | Update docs | Thomas White | |
2015-09-15 | Implement Felix Indexer | Kenneth Beyerlein | |
2015-09-03 | Tweak the docs again | Thomas White | |
2015-08-31 | partialator: Add --max-rel-B | Thomas White | |
2015-08-31 | Update docs | Thomas White | |
2015-08-31 | Update docs | Thomas White | |