CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2021-10-28	Add 'mask_panel_edges' to geometry file	Thomas White
	Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/27
2021-10-26	Remove detector rail direction altogether	Thomas White
	This got missed out by accident in the conversion to DataTemplate, but absolutely no-one noticed. In the meantime, my views on how the geometry files should work have changed somewhat. I don't want to maintain the extra complexity here when it isn't even clear that it will eliminate the need to re-refine geometry for each camera length. This commit just takes the rail direction stuff out of the documentation and the geometry file parser. Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/50
2021-09-29	Remove old references	Thomas White

2021-03-30	Add header caching layer	Thomas White
	This simultaneously implements --copy-header/--copy-hdf5-field and gives access to metadata (e.g. detector position or wavelength) when loading from a stream with header-specified values.
2021-03-11	indexamajig: Use static wavelength from DataTemplate as estimate	Thomas White
	If the geometry file contains a literal wavelength, then let's use it. That's better than nagging the user for a --wavelength-estimate.
2021-03-09	Add the ability to use multiple bad pixel masks at once	Thomas White

2021-03-05	Mass update of copyright dates in source code comments	Thomas White

2021-01-14	Avoid very slow loop over pixels to create bad pixel map	Thomas White
	Bad regions specified in terms of x/y still require an iteration over all pixels of the detector, but I don't see an easy way around that. Avoiding x/y bad regions will give best performance.
2021-01-12	Fussiness	Thomas White

2020-12-18	Add peak_list_type in geometry file	Thomas White

2020-12-16	Add flag_{lessthan,morethan,equal} in geometry file	Thomas White
	This makes handling Pilatus/Eiger files, as well as many others, much easier.
2020-08-07	Expose rigid groups	Thomas White

2020-08-04	Add image_write()	Thomas White
	This is a one-to-one transfer of the old hdf5_write_image()
2020-07-31	Set bandwidth in image structure	Thomas White

2020-07-29	Add detector_shift_{x,y} to geometry file	Thomas White

2020-07-29	Add wavelength and electron_voltage, plus units, to geometry file	Thomas White

2020-07-29	Get rid of photon_energy_scale	Thomas White

2020-07-29	Remove dtempl->defaults	Thomas White
	This is 100% private to the parser
2020-07-29	Remove events.c, part 2	Thomas White
	New event parsing, done at the last minute in image-hdf5.c
2020-07-29	Remove peak_info_location	Thomas White
	peak_list already exists
2020-07-29	Set up adu_per_photon correctly	Thomas White

2020-07-29	Add include guards and warning comment	Thomas White

2020-07-29	hdf5_peak_location -> peak_list	Thomas White

2020-07-29	Add a FIXME	Thomas White

2020-07-29	Initial DataTemplate parser (copied from get_detector_geometry)	Thomas White