CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2020-07-29	Port indexamajig to new API, part II	Thomas White
	This also removes a large chunk of legacy code
2020-01-10	Mass update of copyright dates	Thomas White

2019-05-07	Update all source code comments to Doxygen format	Thomas White

2017-05-03	hdfile_set_image(): Remove panel argument	Thomas White
	Seems to have been added in 2014 and is not used at the moment
2017-03-31	Offset peak locations from HDF5 or CXI files by 0.5,0.5	Thomas White
	CrystFEL considers all peak locations to be distances from the corner of the detector panel, in pixel units, consistent with its description of detector geometry. In contrast, Cheetah considers the peak locations to be pixel indices in the data array. Therefore, a half-pixel offset is needed when importing the peak lists. For users who need the old behaviour, this commit adds a new option indexamajig --no-half-pixel-shift to deactivate this offset.
2015-02-20	get_value() -> hdfile_get_value()	Thomas White

2015-02-20	Rationalise get_value() stuff	Thomas White

2015-02-16	indexamajig: --peaks=cxi instead of --peaks=hdf5 --cxi-hdf5-peaks	Thomas White

2015-01-27	Fix some prototypes	Valerio Mariani

2014-12-14	Fussiness	Thomas White

2014-12-14	Read cxidb peak info	Valerio Mariani

2014-09-05	Multi-event mode	Valerio Mariani

2014-09-05	Moved opening of file inside hdf5_read function for better encapsulation	Valerio Mariani

2014-09-05	Updated author lists	Valerio Mariani

2014-09-05	Bugfixes to refactored hdf5 reading and writing functions	Valerio Mariani

2014-09-05	Refactoring of hdf5 reading and writing functions	Valerio Mariani

2014-06-13	Add extern "C" for C++ compatibility	Chuck

2014-05-21	Tidy up headers	Thomas White

2013-10-08	Read scalar values from HDF5 files as 0d arrays	Thomas White
	Historically, scalar values have been represented in our data files as 1d arrays with size=1. Now they are (more correctly) written as 0d arrays. This change allows CrystFEL to read both.
2012-03-23	Add new function hdf5_write_image() to include all relevant information in ↵	Thomas White
	the file
2012-03-09	Update licence notices in line with recommendations from TT	Thomas White

2012-02-22	GPLv3 boilerplate comments	Thomas White

2012-02-22	Introduce "libcrystfel"	Thomas White