CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2017-07-05	Update docs	Thomas White

2017-03-08	Allow indexing system to store its own data, independently of indexing methods	Thomas White
	Previously, the indexing system passed all the information on to the indexing engines and then forgot about it. That made it difficult to do things like check the indexing solution after prediction refinement, because the target unit cell was unavailable. Now, the indexing system itself can keep some information. Of course, that information includes the private pointers for the indexing engines themselves. I took the opportunity to streamline things a little bit. The caller can now set up the indexing system in one step, without having to separately parse the names of the indexing methods. The caller no longer has to keep track of a separate array of methods, instead just one structure which contains everything.
2017-02-02	indexamajig: Add ping mechanism to avoid timing out when trying lots of indexers	Thomas White

2016-01-30	indexamajig: Restore --no-refine	Thomas White
	Adds yet another indexing option...
2016-01-15	Set indexing -nomulti as the default, and add a warning	Thomas White

2016-01-08	Make indexing "retry" and "multi" optional	Thomas White

2015-09-15	Implement Felix Indexer	Kenneth Beyerlein

2015-07-21	Update API docs	Thomas White

2015-06-25	Set MOSFLM default flags to include cell parameters, and add some checks	Thomas White

2015-06-19	Remove ReAx and GrainSpotter	Thomas White
	Neither of these ever really worked, and better algorithms exist now.
2015-06-18	Merge branch 'tolstikova/dirax'	Thomas White
	Conflicts: libcrystfel/src/index.h
2015-04-20	Add INDEXING_DEBUG	Thomas White

2015-02-11	'asdf' indexing method added	Alexandra Tolstikova

2014-09-22	Beam file removal, part I	Thomas White

2014-06-13	Add extern "C" for C++ compatibility	Chuck

2014-05-21	Tidy up headers	Thomas White

2014-05-08	Strip out the "prepare_filename" rubbish	Thomas White

2013-12-03	Update docs	Thomas White

2013-10-29	Change XDS default behaviour, and add warning about axis permutation	Thomas White

2013-09-13	Add INDEXING_SIMULATION for streams made by partial_sim	Thomas White

2013-03-01	Update docs (and shake out buglets revealed along the way)	Thomas White

2013-02-22	Move processing pipeline to separate file	Thomas White

2013-02-19	Add -cell and -nocell to indexing methods	Thomas White

2013-02-18	Update XDS for new indexing subsystem	Thomas White

2013-02-18	Merge branch 'cornelius/xds' into tom/multicrystal	Thomas White
	Conflicts: libcrystfel/Makefile.am libcrystfel/src/index.c libcrystfel/src/index.h
2013-02-18	Read GrainSpotter's output properly	Thomas White

2013-02-18	Merge branch 'tom/grainspotter' into tom/multicrystal	Thomas White
	Conflicts: libcrystfel/Makefile.am libcrystfel/src/index.c libcrystfel/src/index.h
2013-02-12	Improve handling of indexing methods	Thomas White

2013-02-09	Clarify lattice type information	Thomas White

2013-02-05	Indexing pipeline - "done"!	Thomas White

2013-02-04	Indexing stuff	Thomas White

2013-02-01	WIP on new indexing pipeline logic	Thomas White

2013-01-28	Tried to fix errors in xds.c	Cornelius Gati

2013-01-28	Changed index.c/.h	Cornelius Gati

2013-01-08	Skeleton indexing method for GrainSpotter	Thomas White

2013-01-04	Tidy up documentation	Thomas White

2012-05-25	WIP on tidy-up	Thomas White

2012-03-12	Update copyright notices to show actual contribution years	Thomas White

2012-03-09	Update licence notices in line with recommendations from TT	Thomas White

2012-02-22	GPLv3 boilerplate comments	Thomas White

2012-02-22	Added "--tolerance" option in indexamajig	Lorenzo Galli

2012-02-22	Move indexing and rendering to libcrystfel	Thomas White