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path: root/libcrystfel/src/integration.c
AgeCommit message (Expand)Author
2015-06-26Plug some more leaksThomas White
2015-06-18Replace semaphore with a mutexThomas White
2015-06-17Use a POSIX semaphore for synchronising terminal access during indexingThomas White
2015-04-28Reject boxes with very large gradients during rings integrationThomas White
2015-04-20Make panel assignments invariant during prediction- and post-refinementThomas White
2015-03-13Move solve_svd() to utilsThomas White
2015-02-12prof2d: Fix number of reference profilesThomas White
2015-02-12Show warning if CrystFEL was compiled without ncursesThomas White
2014-11-28Remove twod_mapping functionValerio Mariani
2014-11-28indexamajig: Report implausibly negative reflections only after final integra...Thomas White
2014-11-27Fix pre-merging Poisson error calculation for low photon countsThomas White
2014-11-26Do not predict reflections beyond the resolution limit in the first placeThomas White
2014-11-26Show panel name and correct coordinates in int-diagThomas White
2014-11-09Record number of implausibly negative reflections in streamThomas White
2014-11-02Report filename on terminal if it has implausibly negative reflectionsThomas White
2014-10-23Fix a load of memory leaksThomas White
2014-09-25Remove "sphere", "thin" and "gaussian" partiality models, add "scgaussian"Thomas White
2014-09-05Pass the partiality model through correctlyThomas White
2014-08-14Apply overlap mask to BM_IG pixels as wellThomas White
2014-08-14Factorise reflection prediction and do it before creating the maskThomas White
2014-08-13Fix handling of overlapping reflectionsThomas White
2014-08-12Clean up a compiler warning when compiling without cursesThomas White
2014-08-11Take overlaps into account during integrationThomas White
2014-07-24Suspend indexing statistics while --int-diag is displayingThomas White
2014-06-25Pass the partiality model down from the API levelThomas White
2014-04-09Avoid breaking API with integrate_all()Thomas White
2014-04-08indexamajig: Add --push-resThomas White
2014-04-08Remove unused variableThomas White
2014-04-01Fix resolution cutoff so that it (apparently) worksThomas White
2014-03-28Require at least two bright pixels in integration box before moving centreThomas White
2014-03-21FormattingThomas White
2014-03-03Remove silly testThomas White
2014-03-03Test for brightest pixel after checking for closer reciprocal lattice pointThomas White
2014-03-03Include background and peak height in streamThomas White
2014-02-13Fix previous commitThomas White
2014-02-13Don't proceed with integration if no suitable reference reflections were foundThomas White
2013-12-06Count implausible reflections when integrating with prof2dThomas White
2013-12-05Additions to show_peak_box()Thomas White
2013-11-29indexamajig: Add --int-diag=strongThomas White
2013-11-29Avoid '1 implausibly negative reflections'Thomas White
2013-11-28Add UNUSED to a couple of functionsThomas White
2013-11-25Don't refine rigid groupsThomas White
2013-11-25Fix centeringThomas White
2013-11-24show_peak_box(): Add indices and tidy upThomas White
2013-11-24Set red=0 if BG not OKThomas White
2013-11-24Break out setup_profile_boxes()Thomas White
2013-11-24Break out integrate_prof2d_once()Thomas White
2013-11-23indexamajig: Add --int-diag=implausibleThomas White
2013-11-23Don't call resolution_cutoff()Thomas White
2013-11-23Add --int-diag=negativeThomas White
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