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path: root/libcrystfel/src/integration.c
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2015-03-13Move solve_svd() to utilsThomas White
2015-02-12prof2d: Fix number of reference profilesThomas White
Thanks again to Takanori Nakane for spotting this
2015-02-12Show warning if CrystFEL was compiled without ncursesThomas White
2014-11-28Remove twod_mapping functionValerio Mariani
2014-11-28indexamajig: Report implausibly negative reflections only after final ↵Thomas White
integration
2014-11-27Fix pre-merging Poisson error calculation for low photon countsThomas White
2014-11-26Do not predict reflections beyond the resolution limit in the first placeThomas White
This is significantly faster than predicting to the edge then applying the resolution cutoff. With the "new" way of estimating the resolution limit, there's no need to integrate first.
2014-11-26Show panel name and correct coordinates in int-diagThomas White
2014-11-09Record number of implausibly negative reflections in streamThomas White
2014-11-02Report filename on terminal if it has implausibly negative reflectionsThomas White
2014-10-23Fix a load of memory leaksThomas White
2014-09-25Remove "sphere", "thin" and "gaussian" partiality models, add "scgaussian"Thomas White
2014-09-05Pass the partiality model through correctlyThomas White
2014-08-14Apply overlap mask to BM_IG pixels as wellThomas White
... because everything except BM_BH is used for centering.
2014-08-14Factorise reflection prediction and do it before creating the maskThomas White
2014-08-13Fix handling of overlapping reflectionsThomas White
2014-08-12Clean up a compiler warning when compiling without cursesThomas White
2014-08-11Take overlaps into account during integrationThomas White
2014-07-24Suspend indexing statistics while --int-diag is displayingThomas White
2014-06-25Pass the partiality model down from the API levelThomas White
2014-04-09Avoid breaking API with integrate_all()Thomas White
2014-04-08indexamajig: Add --push-resThomas White
2014-04-08Remove unused variableThomas White
2014-04-01Fix resolution cutoff so that it (apparently) worksThomas White
2014-03-28Require at least two bright pixels in integration box before moving centreThomas White
2014-03-21FormattingThomas White
2014-03-03Remove silly testThomas White
2014-03-03Test for brightest pixel after checking for closer reciprocal lattice pointThomas White
2014-03-03Include background and peak height in streamThomas White
2014-02-13Fix previous commitThomas White
2014-02-13Don't proceed with integration if no suitable reference reflections were foundThomas White
2013-12-06Count implausible reflections when integrating with prof2dThomas White
2013-12-05Additions to show_peak_box()Thomas White
2013-11-29indexamajig: Add --int-diag=strongThomas White
2013-11-29Avoid '1 implausibly negative reflections'Thomas White
2013-11-28Add UNUSED to a couple of functionsThomas White
2013-11-25Don't refine rigid groupsThomas White
2013-11-25Fix centeringThomas White
2013-11-24show_peak_box(): Add indices and tidy upThomas White
2013-11-24Set red=0 if BG not OKThomas White
2013-11-24Break out setup_profile_boxes()Thomas White
2013-11-24Break out integrate_prof2d_once()Thomas White
2013-11-23indexamajig: Add --int-diag=implausibleThomas White
2013-11-23Don't call resolution_cutoff()Thomas White
2013-11-23Add --int-diag=negativeThomas White
2013-11-23More fixes for --int-diagThomas White
2013-11-23indexamajig: Add --int-diagThomas White
2013-11-23FormattingThomas White
2013-11-23Move debugging outputThomas White
2013-11-23Fix mean_var_area()Thomas White
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