CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2015-05-19	Set panel when reading reflections from stream	Thomas White

2015-04-20	Throw out crystals which could not be refined	Thomas White

2015-04-20	Make panel assignments invariant during prediction- and post-refinement	Thomas White
	Reflections appearing and disappearing are problematic when trying to do a least-squares refinement. Therefore, assume that reflections stay on panel and keep them under consideration even if their partialities go to zero (i.e. they drift off Bragg). This should stabilise both refinements, and simplifies quite a lot of code. Collateral "damage": the old "select_intersection()" is now gone.
2015-04-20	open_stream_for_read: read stream from stdin when filename is "-".	Keitaro Yamashita

2015-04-20	Fix a string overflow vulnerability, and banish extract_f_from_stuff()	Thomas White

2015-03-18	Record crystal notes in stream	Thomas White

2015-03-02	Avoid duplication of last line of geometry file in stream	Thomas White

2015-01-27	Split nested code into separate functions	Valerio Mariani

2015-01-27	Fussiness	Valerio Mariani

2015-01-27	Keep hold of HDF5 fields which came from the stream	Valerio Mariani

2015-01-27	Fix type of add_{x,y}	Valerio Mariani

2015-01-27	Formatting	Valerio Mariani

2014-12-09	Fix reading of profile_radius	Thomas White

2014-12-09	Avoid bottoming out precision for beam parameters in stream	Thomas White

2014-12-09	read_stream_reflections_2_3(): set redundancy to 1	Thomas White

2014-11-26	Fix conversion to Angstroms for diffraction_resolution_limit in stream (whoops!)	Thomas White

2014-11-25	Formatting	Thomas White

2014-11-24	Fixed stream I/O across different versions	Valerio Mariani

2014-11-21	Formatting, and fix a comment	Thomas White

2014-11-14	Ensure initialisation of as,bs,cs	Thomas White
	This is mostly just to shut the compiler up about the lack of initialisation.
2014-11-13	Remove unused variables	Thomas White

2014-11-13	Whitespace	Thomas White

2014-11-13	Fix stream reader	Takanori Nakane

2014-11-10	Fussiness	Thomas White

2014-11-10	Copy and Replace when saving geometry	Valerio Mariani

2014-11-09	Record number of implausibly negative reflections in stream	Thomas White

2014-10-24	Put write_stream_reflections_*() in the right order	Thomas White
	This changes nothing else, I promise
2014-10-24	Restore peak and background to stream reflection format 2.3	Thomas White

2014-10-24	Fix/clarify peak coordinates for rearranged panels	Thomas White

2014-10-23	read_stream_reflections_2_3(): Fix detector positions	Thomas White

2014-10-23	Fix a load of memory leaks	Thomas White

2014-10-23	Read back the event ID	Thomas White

2014-10-23	Formatting / fussiness	Thomas White

2014-10-23	Read image serial number back	Thomas White

2014-10-23	Fussiness	Thomas White

2014-10-23	Add serial numbers to chunks	Thomas White

2014-09-11	Tidy up a bit	Thomas White

2014-09-05	More bugfixes for multi-event mode	Valerio Mariani

2014-09-05	Multi-event mode	Valerio Mariani

2014-09-05	Better alignment of stream file elements	Valerio Mariani

2014-09-05	Versioning of reflection and peak I/O	Valerio Mariani

2014-09-05	Updated author lists	Valerio Mariani

2014-09-05	Refactoring of peaks and reflections I/O	Valerio Mariani

2014-09-05	Fussiness	Thomas White

2014-09-05	Update docs	Thomas White

2014-08-19	Clean up a couple of warnings	Thomas White

2014-08-12	Read number of peaks from stream	Takanori Nakane

2014-08-12	partial_sim: Fix free(geomfile)	Thomas White

2014-08-04	Fix number of (integrated) reflections in stream	Thomas White

2014-07-21	Copy geometry file into stream	Valerio Mariani