Age | Commit message (Collapse) | Author | |
---|---|---|---|
2019-07-29 | Re-implement copy_geom() | Thomas White | |
The old version assumed that the rigid groups appeared in the new list in the same order as the old one. Note the use of subscript "i" for both arrays here: if ( rigid_group_is_in_collection( in->rigid_group_collections[rgci], in->rigid_groups[i]) ) [....] add_to_rigid_group_coll(rgcoll, out->rigid_groups[i]); However, the new list of rigid groups, out->rigid_groups, was constructed not by copying the old list (in->rigid_groups), but rather by iterating over the panels and adding the groups as they were encountered. Therefore, the assumption of same ordering was invalid, and the new rigid group collection incorrect. | |||
2019-07-29 | panel_number(): Make args const | Thomas White | |
2019-07-29 | Formatting/comments | Thomas White | |
2019-07-29 | Remove old rg_delta stuff | Thomas White | |
2019-07-24 | compare_cell_parameters_and_orientation(): Fix documentation and variable names | Thomas White | |
2019-07-19 | peakFinder9: remove references to image.num_peaks etc | Thomas White | |
2019-07-19 | Increase maximum geometry length from stream | Thomas White | |
It's already too small | |||
2019-07-17 | Merge branch 'tom/zmq' | Thomas White | |
2019-07-17 | partialator: Add "offset" model (Ewald sphere offset assuming monochromatic ↵ | Thomas White | |
beam) | |||
2019-07-17 | partialator: Use Spectrum API | Thomas White | |
2019-07-16 | hdfile_get_string_value(): Detect non-scalar string | Thomas White | |
Handling strings in HDF5 is already a complete pain. Eventually we should handle an array of strings, but it's too hard for now. | |||
2019-07-16 | hdfile_get_value(): Increase maximum number of dimensions to 64 | Thomas White | |
3 might be too low for a hypothetical file format with, say, two wildcard dimensions. | |||
2019-07-16 | Remove warnings about non-scalar values | Thomas White | |
Already handled by return codes. | |||
2019-07-16 | Generalise get_ev_based_value() to handle non-multievent case | Thomas White | |
... and replace hdfile_get_value() with it | |||
2019-07-05 | load_entire_file(): Ensure string termination | Thomas White | |
2019-07-05 | Update copyright dates | Thomas White | |
2019-07-05 | Add write_detector_geometry_3() (write geometry based on template in memory) | Thomas White | |
2019-07-05 | Read geometry file from start of stream | Thomas White | |
2019-07-05 | Add get_detector_geometry_from_string() | Thomas White | |
2019-06-25 | read_stream_reflections_*: Set symmetric indices for reflections | Thomas White | |
2019-06-19 | Const-cleanliness | Thomas White | |
2019-06-05 | Fix obvious bug in image_add_feature() | Thomas White | |
Introduced by aa1676f35317df92840b27ba78f13c13308bc7d4 | |||
2019-06-04 | spectrum_set_pdf: Use gsl_sort_index() instead of gsl_sort2() | Thomas White | |
This allows compatibility with older versions of GSL. | |||
2019-05-29 | Fix SASE simulation | Thomas White | |
2019-05-29 | Spectrum generation | Thomas White | |
2019-05-29 | Remove old debugging statement | Thomas White | |
2019-05-29 | Use Spectrum API for simulation | Thomas White | |
2019-05-17 | s/histogram/pdf/ | Thomas White | |
2019-05-15 | Spectrum API clarifications | Thomas White | |
2019-05-15 | Complete implementation of Spectrum API | Thomas White | |
2019-05-14 | Start implementing Spectrum API | Thomas White | |
2019-05-14 | Update Spectrum API | Thomas White | |
2019-05-14 | Sketch out Spectrum API | Thomas White | |
2019-05-14 | Remove image.num_peaks and num_saturated_peaks | Thomas White | |
These values were inconsistently set by different parts of the code, e.g. different peak search methods. num_saturated_peaks was even set during final integration. Now, the peak count is taken from the ImageFeatureList, so it's authoritative. | |||
2019-05-14 | Move Histogram out of API | Thomas White | |
It's only used by two test programs | |||
2019-05-14 | Add documentation for search_peaks_peakfinder8 | Thomas White | |
2019-05-14 | Remove old "statistics" module with R factors etc | Thomas White | |
compare_hkl does all of these, much better than these functions. | |||
2019-05-14 | Remove "valid" item from "struct imagefeature" | Thomas White | |
2019-05-08 | Remove unused code | Yaroslav Gevorkov | |
2019-05-08 | Add new xgandalf options | Yaroslav Gevorkov | |
2019-05-07 | Update all source code comments to Doxygen format | Thomas White | |
2019-05-07 | Remove intmat_set_all_3x3() | Thomas White | |
2019-05-07 | Move spectrum type enum to pattern_sim.c | Thomas White | |
2019-04-16 | Recognise (if not handle) all CBF formats | Thomas White | |
2019-04-16 | Basic CBF reader with byte offset decompression | Thomas White | |
2019-04-15 | Strip ouf CBFlib references | Thomas White | |
2019-04-05 | compare_reindexed_cell_parameters: Require lattice to be primitive unless ↵ | Thomas White | |
csl set | |||
2019-04-05 | cell_tool: Add --csl | Thomas White | |
2019-04-03 | hdfsee: Fix crash with no geometry file | Thomas White | |
2019-04-03 | Consider pixel as bad if its value is NaN or infinity | Thomas White | |