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2014-04-08Remove unused variableThomas White
2014-04-01Fix resolution cutoff so that it (apparently) worksThomas White
2014-03-30check_hkl: Add L-testThomas White
2014-03-28Require at least two bright pixels in integration box before moving centreThomas White
2014-03-28validate_peaks(): Count saturated peaks only if they are being rejectedThomas White
2014-03-28integrate_peak(): Useful return codesThomas White
2014-03-26indexamajig: Don't check SNR with --peaks=hdf5 unless given --check-hdf5-snrThomas White
2014-03-24get_ambiguities() should not return the identity operationThomas White
2014-03-24Add parse_symmetry_operations()Thomas White
2014-03-21FormattingThomas White
2014-03-10Merge branch 'detwin'Thomas White
2014-03-10Fix reading and writing of reflections in 2.1 streamThomas White
2014-03-05FormattingThomas White
2014-03-03Remove silly testThomas White
2014-03-03Test for brightest pixel after checking for closer reciprocal lattice pointThomas White
2014-03-03Update docsThomas White
2014-03-03Formatting fussinessThomas White
2014-03-03Swap peak,bg and fs,ss to keep fs,ss in the same placeThomas White
2014-03-03New reflection list formatThomas White
2014-03-03Include background and peak height in streamThomas White
2014-03-03Add things to stream if they were mentioned in beam or geom, and remove ↵Thomas White
clen_ entries
2014-03-03Add missing includesThomas White
Reported by Rick Kirian
2014-02-23build_indexed_list(): Recognise "simulation"Thomas White
Because we also need it to work when reading a stream.
2014-02-22read_chunk(): set indexed_byThomas White
2014-02-18Tweak histogram_get_data()Thomas White
2014-02-18Add histogram_get_num_bins()Thomas White
2014-02-17Add histogram_{set,get}_{min,max}Thomas White
2014-02-17Lorentz factor should not depend on profile radiusThomas White
2014-02-17Merge branch 'master' of ssh://git.bitwiz.org.uk/crystfelThomas White
2014-02-17Add histogram_get_data()Thomas White
2014-02-13Fix previous commitThomas White
2014-02-13Don't proceed with integration if no suitable reference reflections were foundThomas White
2014-02-12partial_sim: Add --imagesThomas White
2014-01-28Add two colour spectrumChun Hong Yoon
2014-01-23pattern_sim: Add --backgroundThomas White
2014-01-21Free det->defaults.clen_from only onceThomas White
The "defaults" structure gets copied along with everything else by copy_geom(). Therefore, the same pointer might end up in two places leading to a double free. Better to free it once only after reading the geometry.
2014-01-21FussinessThomas White
2014-01-21Properly free detector defaults panelKenneth Beyerlein
2014-01-21Fixed memory leaks in free_all_crystals functionKenneth Beyerlein
2014-01-21Made free_rigid_groups function and call in free_detector_geometryKenneth Beyerlein
2014-01-20RNG overhaulThomas White
Previously, we were using random(), which is really really bad.
2014-01-20pattern_sim: Overhaul and add SASE spectrum simulationThomas White
2013-12-17Fix a few compiler warningsThomas White
2013-12-06Count implausible reflections when integrating with prof2dThomas White
2013-12-05Additions to show_peak_box()Thomas White
2013-12-03Update docsThomas White
2013-11-29indexamajig: Add --int-diag=strongThomas White
2013-11-29RefList: Increase maximum index to 511Thomas White
2013-11-29Avoid '1 implausibly negative reflections'Thomas White
2013-11-28Add UNUSED to a couple of functionsThomas White
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