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AgeCommit message (Collapse)Author
2020-08-10Start on converting pinkIndexer to DataTemplateThomas White
2020-08-10pinkIndexer: Remove detector updateThomas White
Overall detector offsets can now be done via the geometry file, and this is labelled as a hack. It doesn't actually do very much anyway, because the "updated" detector is thrown away for the next pattern. The updated detector is used only for subsequent indexing attempts on the same pattern.
2020-08-07Move indexers out of APIThomas White
2020-08-07Remove image->avg_clenThomas White
Horrible API hack.
2020-08-07Expose rigid groupsThomas White
2020-08-04Add image_write()Thomas White
This is a one-to-one transfer of the old hdf5_write_image()
2020-08-04Add image_create_for_simulation()Thomas White
...and factorise common code
2020-07-31Move spectrum loading out of indexamajig/process_imageThomas White
2020-07-31Set bandwidth in image structureThomas White
2020-07-30Fix placeholder countingThomas White
2020-07-30Add show_panel() to APIThomas White
2020-07-30Add missing config.h includesThomas White
2020-07-30asdf: Fix includesThomas White
Not sure what dirax.h was doing there, and cell.h should really be included.
2020-07-30Request that FFTW uses "double[2]", not "complex" for fftw_complexThomas White
Normally, FFTW uses the C99 "complex" type for fftw_complex, if complex.h is included before fftw3.h. We do not use complex.h, and want the double[2] version otherwise the code breaks horribly. Unfortunatley, under certain build scenarios, complex.h seems to get included via the GSL headers. Adding #define FFTW_NO_Complex prevents this.
2020-07-30Add include guards to version headersThomas White
2020-07-30Eliminate duplicate symbolsThomas White
This makes searching easier, and also permits Meson's unity build mode.
2020-07-29Version information via MesonThomas White
2020-07-29New way of injecting version informationThomas White
Also, this fixes some incorrect headers and adds --version flags to programs which didn't yet have them.
2020-07-29Fix a couple of memory bugs in event expansionThomas White
2020-07-29Expose a couple more functions for easier testingThomas White
2020-07-29Add low-level integration API (for better testing)Thomas White
2020-07-29Remove config.h from libcrystfel headersThomas White
Same reason as removing them from tests. Also, libcrystfel might be used in projects which have HAVE_CONFIG_H defined.
2020-07-29Add show_panel (debug function)Thomas White
2020-07-29Don't try to apply shift if no value is givenThomas White
2020-07-29stream_read_chunk: Add option to load image dataThomas White
2020-07-29const-cleaningThomas White
2020-07-29Fix reading of geometry from streamThomas White
2020-07-29Unify creation of blank image data arraysThomas White
2020-07-29Add --no-image-data and --no-mask-dataThomas White
2020-07-29Move image structure creation up to image_read()Thomas White
2020-07-29Add detector_shift_{x,y} to geometry fileThomas White
2020-07-29Remove coffset from parse_toplevelThomas White
It's handled already by the parse_field_for_panel(defaults, ...)
2020-07-29Add wavelength and electron_voltage, plus units, to geometry fileThomas White
2020-07-29Add missing newlinesThomas White
2020-07-29Handle scalar values for HDF5 headersThomas White
2020-07-29Set default event ID when reading from HDF5 with NULL eventThomas White
2020-07-29Add an error path for parse_toplevelThomas White
2020-07-29Get rid of photon_energy_scaleThomas White
2020-07-29Add cell_print_onelineThomas White
2020-07-29Add crystfel_has_peakfinder9()Thomas White
separate config.h file.
2020-07-29Create detgeom and data arrays when reading from streamThomas White
2020-07-29Don't double-count last chunkThomas White
2020-07-29Fix peak list loading from streamThomas White
I don't think this functionality has ever actually been used. It was completely broken.
2020-07-29data_template_free: Allow NULLThomas White
2020-07-29Random access Stream APIThomas White
2020-07-29Update commentsThomas White
2020-07-29Set a default data locationThomas White
2020-07-29stream_close: Handle NULLThomas White
2020-07-29Add missing prototypeThomas White
2020-07-29Avoid segfault if there are no panels in DataTemplateThomas White
Obviously, this should never happen.
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