Age | Commit message (Collapse) | Author | |
---|---|---|---|
2019-05-15 | Spectrum API clarifications | Thomas White | |
2019-05-15 | Complete implementation of Spectrum API | Thomas White | |
2019-05-14 | Start implementing Spectrum API | Thomas White | |
2019-05-14 | Update Spectrum API | Thomas White | |
2019-05-14 | Sketch out Spectrum API | Thomas White | |
2019-05-14 | Remove image.num_peaks and num_saturated_peaks | Thomas White | |
These values were inconsistently set by different parts of the code, e.g. different peak search methods. num_saturated_peaks was even set during final integration. Now, the peak count is taken from the ImageFeatureList, so it's authoritative. | |||
2019-05-14 | Move Histogram out of API | Thomas White | |
It's only used by two test programs | |||
2019-05-14 | Add documentation for search_peaks_peakfinder8 | Thomas White | |
2019-05-14 | Remove old "statistics" module with R factors etc | Thomas White | |
compare_hkl does all of these, much better than these functions. | |||
2019-05-14 | Remove "valid" item from "struct imagefeature" | Thomas White | |
2019-05-08 | Remove unused code | Yaroslav Gevorkov | |
2019-05-08 | Add new xgandalf options | Yaroslav Gevorkov | |
2019-05-07 | Update all source code comments to Doxygen format | Thomas White | |
2019-05-07 | Remove intmat_set_all_3x3() | Thomas White | |
2019-05-07 | Move spectrum type enum to pattern_sim.c | Thomas White | |
2019-04-16 | Recognise (if not handle) all CBF formats | Thomas White | |
2019-04-16 | Basic CBF reader with byte offset decompression | Thomas White | |
2019-04-15 | Strip ouf CBFlib references | Thomas White | |
2019-04-05 | compare_reindexed_cell_parameters: Require lattice to be primitive unless ↵ | Thomas White | |
csl set | |||
2019-04-05 | cell_tool: Add --csl | Thomas White | |
2019-04-03 | hdfsee: Fix crash with no geometry file | Thomas White | |
2019-04-03 | Consider pixel as bad if its value is NaN or infinity | Thomas White | |
2019-04-02 | compare_reindexed_cell_parameters: Bail out when there are no candidate vectors | Thomas White | |
2019-03-26 | Fix order of matrix operations in compare_reindexed_cell_parameters() | Thomas White | |
2019-03-20 | Fix matrix conventions for symmetry operations | Thomas White | |
2019-03-13 | cell_transform_rational: Complain if matrix is singular | Thomas White | |
2019-03-13 | determine_centering: Check 1,1,1 in both directions | Thomas White | |
The original centering must be able to provide a lattice point for 1,1,1 in the new centering. The new centering's 1,1,1 point must also map to a lattice point in the original centering. Note that it's no use checking 0,0,0, because it'll just be a load of zeroes. | |||
2019-03-13 | validate_cell: Allow to tell the difference between serious problems and ↵ | Thomas White | |
warnings | |||
2019-03-13 | Remove intmat_solve_rational | Thomas White | |
Not used anywhere | |||
2019-03-13 | Rename m to P, to match documentation (including ITA) | Thomas White | |
2019-03-13 | Rename rtnl_mtx_solve and rtnl_mtx_mult to make their purpose clearer | Thomas White | |
2019-03-13 | Fix matrix notation in symmetry operations | Thomas White | |
2019-03-12 | Rename intmat_intvec_mult to transform_indices | Thomas White | |
2019-03-12 | Get rid of two unused functions | Thomas White | |
2019-03-12 | TakeTwo: Restore correct matrix multiplication for solution | Thomas White | |
2019-03-11 | TakeTwo: take change in IntegerMatrix notation into account | Thomas White | |
2019-03-11 | Remove commented code | Thomas White | |
2019-03-11 | Get rid of cell_transform_gsl_reciprocal() | Thomas White | |
It's confusing to have matrices acting on both real and reciprocal vectors. Let's standardise instead on transformations always applying to real-space cells. It was only used in one place. | |||
2019-03-11 | Change matrix notation to match ITA chapter 5.1 | Thomas White | |
2019-03-11 | Add a comment | Thomas White | |
2019-03-11 | Single point of truth for matrix memory layout | Thomas White | |
2019-03-11 | Fix typo | Thomas White | |
2019-03-11 | Add remaining centering types and finalise centering determination | Thomas White | |
2019-03-11 | Automatic centering determination after transformation | Thomas White | |
2019-03-11 | Initial centering determination | Thomas White | |
2019-03-11 | More tidying up of cell comparison | Thomas White | |
2019-03-11 | Find the best cell match, not just the first one | Thomas White | |
2019-03-11 | Tidy up cell comparison | Thomas White | |
2019-03-11 | Keep track of the "un-centering" matrix, as well as the "centering" | Thomas White | |
This makes it easy to reverse the transformation, if required, which it is when comparing centered cells. | |||
2019-03-11 | Add rtnl_mtx_identity() | Thomas White | |