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AgeCommit message (Collapse)Author
2013-01-09Matrix reading stuffThomas White
2013-01-09GrainSpotter interface (works)Thomas White
2013-01-08Skeleton indexing method for GrainSpotterThomas White
2013-01-04Tidy up documentationThomas White
2013-01-04integrate_peak(): check that 'saturated' isn't NULL before usingThomas White
Fixes a segfault
2012-12-14Beam and detector geometry don't need to be copiedThomas White
The did when this was all done with threads, but with separate processes each worker has its own copy of the structure already. It can be updated after every image and freed at the end.
2012-12-14WhitespaceThomas White
2012-12-13more user options for beam photon energyChun Hong Yoon
2012-12-05WhitespaceThomas White
2012-12-03Treat SNR=nan (=0/0) as below any SNR thresholdThomas White
2012-12-03FussinessThomas White
2012-12-03Use a less scary message for EINTRThomas White
This is almost completely benign, and happens when profiling.
2012-11-30Fix uninitialised saturation flagThomas White
2012-11-30Calculate minimum and maximum 1/d without iterating over every pixelThomas White
2012-11-29indexamajig: Add --use-saturatedThomas White
2012-11-29Suppress "Couldn't sort reflections" message when there are no predicted peaksThomas White
2012-11-29indexamajig: Add --integrate-saturatedThomas White
2012-11-21Show error information if forkpty() failsThomas White
2012-10-22Fix argument to add_symop()Thomas White
2012-10-22indexamajig: Validate (re-integrate, check bad regions etc) peaks from HDF5Thomas White
2012-10-22Fix (still) broken bad rectangle testThomas White
2012-10-21indexamajig: Record number of saturated reflections in streamThomas White
2012-10-20Merge branch 'master' of ssh://git.bitwiz.org.uk/crystfelThomas White
2012-10-20integrate_peak(): Restore check for bad regionThomas White
This fixes a regression introduced by ad2c84d0, predating the initial CrystFEL release.
2012-10-20Not actually deprecated (yet)Thomas White
2012-10-20Remove unused variableThomas White
2012-10-20Update documentationThomas White
2012-10-20Extreme fussinessThomas White
2012-10-19Don't predict systematically absent reflectionsThomas White
D'oh
2012-10-19Update a commentThomas White
2012-10-19Convert SymOpList to use IntegerMatrixThomas White
This simplifies things a lot
2012-10-19Add useful commentsThomas White
2012-10-19Switch off INVERTX for MOSFLMThomas White
2012-10-19FormattingThomas White
2012-10-17describe_symmetry(): Don't attempt to display "i"Thomas White
It makes an invalid assumption about the setting
2012-10-17describe_symmetry(): More faffThomas White
2012-10-17describe_symmetry: Improve paddingThomas White
2012-10-17describe_symmetry: Print plus sign only if a minus sign isn'tThomas White
2012-10-17describe_symmetry: Add commas when neededThomas White
2012-10-15Add add_op_intmat()Thomas White
2012-10-15Add intmat_is_identity()Thomas White
2012-10-15Add tfn_from_intmat()Thomas White
2012-10-11Tie off loose endsThomas White
This whole idea is rubbish. There's no way to communicate the setting information via the H-M spacegroup symbol in this way, except in a few circumstances. See ITA (2005) section 4.3. This simplifies matters a lot. There's no need for any extra parsing, because the "_uaX" system is sufficient, and is the best that can be done without inventing a whole new system for point group symbols.
2012-10-11Fix MOSFLM space groups (really the last time)Thomas White
This whole idea is rubbish. There's no way to communicate the setting information via the H-M spacegroup symbol in this way, except in a few circumstances. See ITA (2005) section 4.3.
2012-10-10const-ify the integer matrix libraryThomas White
2012-10-10Split cofactor calculationThomas White
2012-10-10WhitespaceThomas White
2012-10-10Handle weird unique axis variants of all point groupsThomas White
2012-10-04Fix a FIXMEThomas White
2012-10-03Fix MOSFLM space groups a (hopefully) final timeThomas White
More woes resulting from "H centering"...
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