CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2017-05-18	Small fixes	Thomas White

2017-05-18	Formatting	Thomas White

2017-05-18	Formatting	Thomas White

2017-05-18	Fix uninitialised variable	Thomas White

2017-05-18	Various fiddles to add symmetry operations but not functional	Helen Ginn

2017-03-24	Merge branch 'taketwo' of ssh://git.bitwiz.org.uk/crystfel into taketwo	Helen Ginn

2017-03-24	Now tries the shortest vectors first.	Helen Ginn

2017-02-02	Merge branch 'master' into taketwo	Thomas White

2017-02-02	indexamajig: Add ping mechanism to avoid timing out when trying lots of indexers	Thomas White

2017-02-01	asdf.c: Divide volume constraints by number of lattice points per unit cell. ↵	Alexandra Tolstikova
	Add F centering
2017-02-01	asdf.c: Divide volume constraints by number of lattice points per unit cell ↵	Alexandra Tolstikova
	since asdf always finds primitive cell
2017-02-01	Fix malloc fail due to integer overflow in N_triplets	Alexandra Tolstikova

2017-02-01	Change volume_min, volume_max and d_max when indexing=asdf-comb	Alexandra Tolstikova

2017-02-01	Change d_max according to the provided cell	Alexandra Tolstikova

2017-01-18	Remove error messages	Helen Ginn

2017-01-18	One image has no more leaks from taketwo.c	Helen Ginn

2017-01-18	Significant reduction in leakage, not done yet.	Helen Ginn

2017-01-18	Fixed more memory errors	Helen Ginn

2017-01-18	Goodbye memory leaks!	Helen Ginn

2017-01-18	Fiddled with parameters, now nice for CPV17. Fixed a ton of bugs too	Helen Ginn

2017-01-17	Random indentation plus faffing with parameters.	Helen Ginn

2017-01-17	Removed all debug messages, nice and clean.	Helen Ginn

2017-01-17	General beginning of tidying and removing some debug statements and return ↵	Helen Ginn
	best solution if they're all too rubbish to hit the threshold - not tested
2017-01-17	Fiddles with parameters - more sensible now	Helen Ginn

2017-01-17	Fiddle with parameter - temporary	Helen Ginn

2017-01-17	Remove flip required for cppxfel coordinate system	Helen Ginn

2017-01-17	Add rlp retrieval from peak list and tidy up the output to the screen a tad	Helen Ginn

2017-01-17	Committing all newest antics which DOES produce a decent solution for a ↵	Helen Ginn
	decent peak list...
2016-12-09	New polarisation correction	Thomas White

2016-11-25	Display line numbers at which stream is corrupted	Thomas White

2016-11-11	Fussiness	Helen Ginn

2016-11-11	Send all possible seeds through the seed-starter	Helen Ginn

2016-11-11	Find potential matches between observed and simulated vectors now returns a ↵	Helen Ginn
	list, not a single match, in preparation for being more thorough searching
2016-11-10	Fix 2theta calculation in locate_peak_on_panel()	Thomas White
	The "improved" version of this, added by 9b1374999 along with the new spot position calculation for out-of-plane panels, actually assumes that the reflection is at the exact Bragg condition. This is not a valid assumption here. The difference is small (<0.5 px), but made the prediction refinement gradients completely wrong.
2016-11-04	Add (more) warnings about unique axes	Thomas White

2016-11-04	Fixes the bug I discovered in Hamburg - closest_rot_mat needs to check whether	Helen Ginn
	the theta angle is the minimum or maximum angle or whether to add Pi.
2016-10-25	TEMPORARY horrible debugging stuff	Thomas White

2016-10-25	j_idx	Thomas White

2016-10-25	Sort the vectors according to distance, and use a larger tolerance	Thomas White

2016-10-24	Separate tolerance for matrix trace	Thomas White

2016-10-24	D'oh	Thomas White

2016-10-20	Fussiness	Thomas White

2016-10-20	Set tolerance	Thomas White

2016-10-20	Vector fixes	Thomas White

2016-10-20	Add tracking of cell match numbers to taketwo.c	cppxfel

2016-10-20	Add the central beam	Thomas White

2016-10-20	Fix indices	Thomas White

2016-10-20	Formatting	Thomas White

2016-10-19	Minor cleanups	Thomas White

2016-10-19	Normalise the rotation axis	Thomas White