aboutsummaryrefslogtreecommitdiff
path: root/libcrystfel
AgeCommit message (Collapse)Author
2020-02-04Handle CRLF line terminators in geometry filesThomas White
This was broken by d62367db8fee57, which was some enabling work for reading geometry info from streams.
2020-01-10Mass update of copyright datesThomas White
2019-12-13pair_peaks: Don't attempt to pair 000Thomas White
Normally the beam centre is masked out or not on the detector. However, when it is, pairing with 000 causes gradients to come out as NaN and the prediction refinement to fail.
2019-11-18PinkIndexer documentationYaroslav Gevorkov
2019-11-15Add partiality model GGPMWolfgang Brehm
2019-11-13fix long variable names in argp_optionYaroslav Gevorkov
2019-11-13rename "overriden" to "custom"Yaroslav Gevorkov
2019-11-13catch input errorYaroslav Gevorkov
2019-11-13add option --pinkIndexer-override-visible-energy-rangeYaroslav Gevorkov
2019-11-13Fix peak check logic for multiple crystalsThomas White
It seems that the code wasn't properly updated when multi-crystal indexing was introducted. This "continue" statement didn't do anything.
2019-11-05bug fix for standard bandwidth in pinkIndexerYaroslav Gevorkov
2019-11-05bug fix in Ewald sphere width calculationYaroslav Gevorkov
2019-10-29add "override" beam options to pinkIndexerYaroslav Gevorkov
2019-10-24polarisation_correction: Use symmetric indicesThomas White
2019-10-24polarisation_correction: Scale the sigma as wellThomas White
2019-10-22xds: Fix handedness of unit cellThomas White
Previously, it was wired to give left handed cells.
2019-10-22Add more warningsThomas White
2019-10-22Add some warnings and assertionsThomas White
2019-10-22reduce_g6: Fix sign criterion for step 3Thomas White
2019-10-11Copy target cell's lattice type and unique axis into cell from indexing, ↵Thomas White
after comparison
2019-09-26Restore CMake stuff for PinkIndexerThomas White
See 3fe28041e where it was temporarily removed.
2019-09-23Get rid of "rescut" integration flagThomas White
Its behaviour is 100% covered by the push-res parameter, which can be set to infinity for no cutoff.
2019-09-23Remove private option structures from iargsThomas White
2019-09-23Merge branch 'tom/pinkindexer'Thomas White
2019-09-20Delegate option processing for indexing methodsThomas White
Involves switching from getopt_long to argp. A big improvement!
2019-09-17Add warning if reflections could not be integrated (e.g. due to overlap)Thomas White
2019-09-16Fix cell comparison logicThomas White
2019-09-13Remove unused checksThomas White
Add them back in when they're actually used, of course
2019-09-12Fix sign of zl comparisonThomas White
2019-09-12Restore default bandwidth (if not specified in geometry file)Thomas White
2019-09-12Fix logicThomas White
2019-09-12Force --no-check-peaks and --no-refine if pinkIndexer is used, and add a warningThomas White
2019-09-12Increase indexing timeout when using pinkIndexerThomas White
2019-09-12Add indexing_methods() to examine the actual list of methodsThomas White
2019-09-12Remove message directing to old optionThomas White
2019-09-12Avoid duplication of beam and detector parameters for pinkIndexerThomas White
2019-09-12bug fix: asking for detector distance != 0 instad of beamBandwidth != 0Yaroslav Gevorkov
2019-09-12pinkIndexer: Remove debugging messagesThomas White
2019-09-12Accept --indexing=pinkindexer (lower case)Thomas White
2019-09-12Set task name for PinkIndexerThomas White
2019-09-12Add GPL boilerplateThomas White
2019-09-12WhitespaceThomas White
2019-09-12Add pinkIndexer interfaceYaroslav Gevorkov
2019-09-12Fix possibly uninitialised overlap_integralThomas White
Introduced by b6af09d78d49d552a05b81bd20a7854a180373f5
2019-09-12Fix possibly uninitialised CiAMCBThomas White
2019-09-10sort_peaks(): Handle NULL peak listThomas White
2019-09-06Use new peak check only when doing multi-lattice indexingThomas White
2019-09-06New check for indexing solutions (copied across from pinkIndexer)Thomas White
2019-09-05Allow the polarsation correction to be completely disabledThomas White
2019-09-03Fix memory leaks in cell comparisonThomas White
generated by cgit v1.2.3 (git 2.25.1) at 2024-06-02 12:09:03 +0000