Age | Commit message (Collapse) | Author | |
---|---|---|---|
2016-10-25 | TEMPORARY horrible debugging stuff | Thomas White | |
2016-10-25 | j_idx | Thomas White | |
2016-10-25 | Sort the vectors according to distance, and use a larger tolerance | Thomas White | |
2016-10-24 | Separate tolerance for matrix trace | Thomas White | |
2016-10-24 | D'oh | Thomas White | |
2016-10-20 | Fussiness | Thomas White | |
2016-10-20 | Set tolerance | Thomas White | |
2016-10-20 | Vector fixes | Thomas White | |
2016-10-20 | Add tracking of cell match numbers to taketwo.c | cppxfel | |
2016-10-20 | Add the central beam | Thomas White | |
2016-10-20 | Fix indices | Thomas White | |
2016-10-20 | Formatting | Thomas White | |
2016-10-19 | Minor cleanups | Thomas White | |
2016-10-19 | Normalise the rotation axis | Thomas White | |
2016-10-19 | Default/required/optional flags for TakeTwo | Thomas White | |
2016-10-19 | D'oh | Thomas White | |
2016-10-19 | Fix weird pointers | Thomas White | |
2016-10-19 | Fix maximum index determination | Thomas White | |
2016-10-19 | Fix units in constants | Thomas White | |
2016-10-19 | Formatting | Thomas White | |
2016-10-19 | Fix iteration bounds | Thomas White | |
2016-10-19 | Final hooky bits | Thomas White | |
2016-10-19 | Generate the resulting cell | Thomas White | |
2016-10-19 | Add transform_cell_gsl() | Thomas White | |
2016-10-19 | gen_theoretical_vecs | Thomas White | |
2016-10-19 | rot_mats_are_similar | Thomas White | |
2016-10-19 | Fussiness (extreme) | Thomas White | |
2016-10-18 | Fix up last commit | Thomas White | |
2016-10-18 | secondTwizzleMatrix | Thomas White | |
2016-10-18 | Implmement closest_rot_mat | Thomas White | |
2016-10-18 | Fixup last commit | Thomas White | |
2016-10-18 | Rotate obs2 | Thomas White | |
2016-10-18 | rotation_between_vectors | Thomas White | |
2016-10-18 | ANGLE_TOLERANCE | Thomas White | |
2016-10-18 | Stuff to make it compile | Thomas White | |
2016-10-17 | Initial TakeTwo import | Thomas White | |
Only changes from Helen's code so far: 1. Stripping trailing spaces 2. Tweaking includes (<> -> "") 3. Adding initial CrystFEL hooks at the bottom of taketwo.c 4. Moving definition of struct SpotVec to taketwo.c 5. Removing prototype for run_taketwo from taketwo.h (comment moved to .c) 6. Authorship/copyright boilerplate | |||
2016-10-14 | validate_peaks(): Remove drifting and proximity checks, and use original ↵ | Thomas White | |
coordinates We trust the HDF5 peaks, even if we can't see a peak there. That means we can't reliably take a centroid and "improve" the coordinates. In some cases, the centroiding procedure seems to be making the peak coordinates worse than they were originally. Now, the only remaining checks are: 1. Is the peak in a bad region of the detector? 2. Is it saturated? (but --use-saturated is the default) 3. If --check-hdf5-snr, is it above the minimum SNR? | |||
2016-10-10 | Fix bad regions | Thomas White | |
Previously, this was broken when not using a mask | |||
2016-10-10 | Add missing newline | Thomas White | |
2016-10-10 | Fussiness / boilerplate | Thomas White | |
2016-10-10 | Added detector shift to crystal structure, wrote get and get functions | Valerio Mariani | |
2016-10-07 | XDS: Clean up open files | Thomas White | |
2016-10-06 | hdf5_write_image(): Write the correct data | Thomas White | |
2016-10-06 | hdf5_write_image(): Use correct dataspace for writing | Thomas White | |
2016-10-06 | pattern_sim: Fix loop bounds in record_image() | Thomas White | |
2016-09-12 | Add newline at end of geometry file in stream, if not already present | Thomas White | |
2016-09-12 | Restore loading of saturation map | Thomas White | |
2016-09-12 | Restore loading of bad pixel map | Thomas White | |
2016-09-07 | XDS: Create fake coordinates taking detector z into account | Thomas White | |
2016-09-07 | Mosflm: Create fake coordinates taking detector z into account | Thomas White | |