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2020-09-04stream_make_index: Don't require an event ID for every chunkThomas White
Event ID is not written if not needed
2020-09-04make_key: Handle NULL eventThomas White
2020-09-04New API for random access to streamThomas White
2020-09-02Get rid of STREAM_IMAGE_DATAThomas White
No longer needed, and didn't fit very well in the first place.
2020-08-27TakeTwo: Remove internal declarationsThomas White
2020-08-27Fix indentationThomas White
2020-08-27Only compile image-msgpack.c if MessagePack is foundThomas White
2020-08-25Factor out convert_intThomas White
2020-08-20Add default_method_options()Thomas White
This allows the indexing method private options structures to be set up easily.
2020-08-19Set the same initial beam parameters as beforeThomas White
2020-08-19Update old commentsThomas White
2020-08-19Remove STREAM_UNITCELL and STREAM_CRYSTALSThomas White
These flags weren't orthogonal at all, which was turning some routines into spaghetti-code. It's still possible to avoid read/write of peak lists, reflection data or image data. But that's it.
2020-08-19Const-cleaningThomas White
2020-08-19Make Stream responsible for its own DataTemplateThomas White
It makes no sense for a different DataTemplate to be used for every frame in a stream. And this way makes everything much easier for users ot the API.
2020-08-18Formatting/commentsThomas White
2020-08-18predict-refine: Remove out-of-bounds GSL vector accessThomas White
We got away with this because the GSL error handler is turned off in indexamjig.c, and invalid accesses are defined to return 0. However, these accesses should have been removed when the clen refinement was disabled in predict-refine
2020-08-17Expose parse_indexing_methods and base_indexer_strThomas White
2020-08-17FormattingThomas White
2020-08-11image_read_image_data: Set zero values if file not foundThomas White
2020-08-10image_read: Tolerate event==NULLThomas White
2020-08-10Disable pinkIndexerThomas White
Temporary, of course. But it needs some thought about how the interface should work.
2020-08-10Start on converting pinkIndexer to DataTemplateThomas White
2020-08-10pinkIndexer: Remove detector updateThomas White
Overall detector offsets can now be done via the geometry file, and this is labelled as a hack. It doesn't actually do very much anyway, because the "updated" detector is thrown away for the next pattern. The updated detector is used only for subsequent indexing attempts on the same pattern.
2020-08-07CMake: Fix incorrect variable namesThomas White
These are different when using pkg-config compared to the custom scripts.
2020-08-07Move indexers out of APIThomas White
2020-08-07Remove image->avg_clenThomas White
Horrible API hack.
2020-08-07Expose rigid groupsThomas White
2020-08-04Add image_write()Thomas White
This is a one-to-one transfer of the old hdf5_write_image()
2020-08-04Add image_create_for_simulation()Thomas White
...and factorise common code
2020-08-03Update name of FDIP packageThomas White
2020-08-03CMake: Switch to pkg-config for Xgandalf, PinkIndexer and FDIPThomas White
2020-07-31Xgandalf/PinkIndexer/FDIP now have pkg-configThomas White
2020-07-31Move spectrum loading out of indexamajig/process_imageThomas White
2020-07-31Set bandwidth in image structureThomas White
2020-07-31Remove unused NBP detectionThomas White
2020-07-30Fix placeholder countingThomas White
2020-07-30Add show_panel() to APIThomas White
2020-07-30Add checks for Xgandalf, PinkIndexer and FDIPThomas White
PinkIndexer still needs updating for DataTemplate. FDIP weirdly needs two include paths, so it doesn't work here currently.
2020-07-30Add missing config.h includesThomas White
2020-07-30CMake: Always build asdf.cThomas White
As of 55df542018664, asdf.c itself decides what code to use.
2020-07-30asdf: Fix includesThomas White
Not sure what dirax.h was doing there, and cell.h should really be included.
2020-07-30Request that FFTW uses "double[2]", not "complex" for fftw_complexThomas White
Normally, FFTW uses the C99 "complex" type for fftw_complex, if complex.h is included before fftw3.h. We do not use complex.h, and want the double[2] version otherwise the code breaks horribly. Unfortunatley, under certain build scenarios, complex.h seems to get included via the GSL headers. Adding #define FFTW_NO_Complex prevents this.
2020-07-30Add include guards to version headersThomas White
2020-07-30Eliminate duplicate symbolsThomas White
This makes searching easier, and also permits Meson's unity build mode.
2020-07-29Use conf_data instead of -DThomas White
2020-07-29Add ncurses to MesonThomas White
2020-07-29Add check for gzbuffer with MesonThomas White
2020-07-29Version information via MesonThomas White
2020-07-29New way of injecting version informationThomas White
Also, this fixes some incorrect headers and adds --version flags to programs which didn't yet have them.
2020-07-29Create pkg-config file via MesonThomas White
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