CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2014-05-22	Rationalise and document stream "open for write" functions	Thomas White
	A nice side-effect is that streams now only have one set of headers
2014-05-08	Strip out the "prepare_filename" rubbish	Thomas White

2013-10-10	indexamajig: Add --temp-dir	Thomas White

2013-08-26	Fix previous commit	Thomas White

2013-08-26	Display indexing yield as a percentage	Thomas White

2013-03-17	Fix race condition in reader thread	Thomas White
	I'm not sure what this line was doing. Hopefully just a "brain fart" from before.
2013-02-22	Fussiness	Thomas White

2013-02-22	If no progress, still check if everything's finished or not	Thomas White

2013-02-22	Avoid fclose(NULL)	Thomas White

2013-02-22	Avoid the use of stdio for writing to final stream	Thomas White
	Something really weird goes on when using stdio
2013-02-22	Keep Valgrind quiet	Thomas White

2013-02-22	Move processing pipeline to separate file	Thomas White

2013-02-22	Create temporary folders only when necessary	Thomas White
	They might already exist if a previous worker process died and was restarted.
2013-02-22	Even more robust stream handling	Thomas White

2013-02-22	More robust stream marshalling	Thomas White

2013-02-19	Fix incorrect path in stream (which broke check-near-bragg et al.)	Thomas White

2013-02-19	D'oh	Thomas White

2013-02-19	Don't add ../../ to the filename if it's already absolute	Thomas White

2013-02-18	Use a different folder for each worker process	Thomas White

2013-02-15	Fussiness	Thomas White

2013-02-12	Don't lose the last chunks from each worker	Thomas White

2013-02-11	Improve and fix stream marshalling	Thomas White

2013-02-09	Fussiness, formatting and SPOT	Thomas White

2013-02-09	Rework indexamajig option processing	Thomas White

2013-02-09	Add '--res-cutoff'	Thomas White

2013-02-08	Small tweaks	Thomas White

2013-02-08	Put the command line back in the stream	Thomas White

2013-02-08	Update docs, comments etc	Thomas White

2013-02-05	Fixes for indexing pipeline	Thomas White

2013-02-05	Indexing pipeline - "done"!	Thomas White

2013-01-10	indexamajig: Add --integrate-found	Thomas White

2012-12-14	Beam and detector geometry don't need to be copied	Thomas White
	The did when this was all done with threads, but with separate processes each worker has its own copy of the structure already. It can be updated after every image and freed at the end.
2012-12-14	Whitespace	Thomas White

2012-12-13	more user options for beam photon energy	Chun Hong Yoon

2012-11-29	indexamajig: Add --no-revalidate and update manpage	Thomas White

2012-11-29	indexamajig: Add --use-saturated	Thomas White

2012-11-29	indexamajig: Add --integrate-saturated	Thomas White

2012-10-22	Formatting	Thomas White

2012-10-22	indexamajig: Validate (re-integrate, check bad regions etc) peaks from HDF5	Thomas White

2012-10-21	indexamajig: Record number of saturated reflections in stream	Thomas White

2012-10-20	Fussiness	Thomas White

2012-10-20	Check for nonsensical value of lambda (too high) in HDF5	Nadia Zatsepin

2012-08-09	indexamajig: Make "-e/--image" work again	Thomas White
	This got lost somewhere in the speed improvements
2012-08-08	Fix buglets spotted by new compiler on Fedora 17	Thomas White

2012-07-29	indexamajig: Count a pattern as 'processed' if the worker process crashed	Thomas White

2012-07-26	New parameter in beam description files: profile_radius	Thomas White

2012-07-24	Formatting	Thomas White

2012-07-23	indexamajig: Remove "Worker <n> exited normally" message	Thomas White

2012-07-20	Break down locking a bit	Thomas White

2012-07-20	Tidy up the exit path from run_work()	Thomas White