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2014-03-03Add things to stream if they were mentioned in beam or geom, and remove ↵Thomas White
clen_ entries
2014-02-02indexamajig: Make --integrate-saturated work againThomas White
This option is provided for backwards compatibility
2013-11-29indexamajig: Add --int-diag=strongThomas White
2013-11-23indexamajig: Ignore -j if --int-cond is usedThomas White
2013-11-23indexamajig: Add --int-diag=implausibleThomas White
2013-11-23Add --int-diag=negativeThomas White
2013-11-23More fixes for --int-diagThomas White
2013-11-23indexamajig: Add --int-diagThomas White
2013-10-10indexamajig: Add --temp-dirThomas White
2013-06-10indexamajig: Fix default integration methodThomas White
2013-06-06Set default integration method to "rings-nocen"Thomas White
Applying the Principle of Least Surprise before merging to master. Previously, it was rings-cen.
2013-06-01Fix memory leak (properly)Thomas White
2013-06-01Fix memory leaksThomas White
2013-05-30Update docsThomas White
2013-05-30indexamajig: Get rid of --use-saturated, because it's now the defaultThomas White
2013-05-30indexamajig: Get rid of --min-integration-snrThomas White
This functionality belongs in process_hkl.
2013-05-28--use-saturated should be the defaultThomas White
2013-05-27Initial integration stuffThomas White
2013-03-11Get rid of "--filter-cm"Thomas White
This was completely specific to pnCCDs, and not even properly general to the different configurations there.
2013-03-11indexamajig: Add --median-filterThomas White
2013-03-01indexamajig: Fix default behaviour for --integrate-saturatedThomas White
2013-02-22Avoid the use of stdio for writing to final streamThomas White
Something really weird goes on when using stdio
2013-02-18indexamajig: Remove --verbose optionThomas White
This hasn't done anything at all since the new indexing subsystem, and hasn't done anything useful for a lot longer.
2013-02-18Whoops: what was labelled as "gradient" was actually "squared gradient"Thomas White
2013-02-09Fussiness, formatting and SPOTThomas White
2013-02-09Fix optionsThomas White
2013-02-09Rework indexamajig option processingThomas White
2013-02-09uncenter_cell: Free transformation if it's not needed by the callerThomas White
2013-02-09Restore control over what goes in the streamThomas White
2013-02-09Clarify lattice type informationThomas White
2013-02-08Small tweaksThomas White
2013-02-08Put the command line back in the streamThomas White
2013-02-08Update docs, comments etcThomas White
2013-02-05Fixes for indexing pipelineThomas White
2013-02-05Indexing pipeline - "done"!Thomas White
2013-02-04Indexing stuffThomas White
2013-01-10Handle '?' return value from getopt_long()Thomas White
2013-01-10FormattingThomas White
2013-01-10indexamajig: Add --integrate-foundThomas White
2012-11-29indexamajig: Add --no-revalidate and update manpageThomas White
2012-11-29indexamajig: Add --use-saturatedThomas White
2012-11-29indexamajig: Add --integrate-saturatedThomas White
2012-10-20indexamajig: Don't load unit cell if none givenThomas White
This fixes some incorrect behaviour introduced by c7712c20.
2012-10-15indexamajig: Fix tiny memory leakThomas White
2012-10-11indexamajig: Load the unit cell whether it's needed or notThomas White
This allows MOSFLM indexing to have access to more information.
2012-10-02Move unit cell utility stuff to separate moduleThomas White
2012-09-04Fix widespread bug-hiding problem with command line argument handlingThomas White
2012-07-15Sandboxy stuffThomas White
2012-07-15Move indexer sandbox to a new fileThomas White
2012-07-13More memory leaks and exit pathsThomas White
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