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2013-02-18indexamajig: Remove --verbose optionThomas White
This hasn't done anything at all since the new indexing subsystem, and hasn't done anything useful for a lot longer.
2013-02-18Whoops: what was labelled as "gradient" was actually "squared gradient"Thomas White
2013-02-09Fussiness, formatting and SPOTThomas White
2013-02-09Fix optionsThomas White
2013-02-09Rework indexamajig option processingThomas White
2013-02-09uncenter_cell: Free transformation if it's not needed by the callerThomas White
2013-02-09Restore control over what goes in the streamThomas White
2013-02-09Clarify lattice type informationThomas White
2013-02-08Small tweaksThomas White
2013-02-08Put the command line back in the streamThomas White
2013-02-08Update docs, comments etcThomas White
2013-02-05Fixes for indexing pipelineThomas White
2013-02-05Indexing pipeline - "done"!Thomas White
2013-02-04Indexing stuffThomas White
2013-01-10Handle '?' return value from getopt_long()Thomas White
2013-01-10FormattingThomas White
2013-01-10indexamajig: Add --integrate-foundThomas White
2012-11-29indexamajig: Add --no-revalidate and update manpageThomas White
2012-11-29indexamajig: Add --use-saturatedThomas White
2012-11-29indexamajig: Add --integrate-saturatedThomas White
2012-10-20indexamajig: Don't load unit cell if none givenThomas White
This fixes some incorrect behaviour introduced by c7712c20.
2012-10-15indexamajig: Fix tiny memory leakThomas White
2012-10-11indexamajig: Load the unit cell whether it's needed or notThomas White
This allows MOSFLM indexing to have access to more information.
2012-10-02Move unit cell utility stuff to separate moduleThomas White
2012-09-04Fix widespread bug-hiding problem with command line argument handlingThomas White
2012-07-15Sandboxy stuffThomas White
2012-07-15Move indexer sandbox to a new fileThomas White
2012-07-13More memory leaks and exit pathsThomas White
2012-07-13Skeleton signal handlerThomas White
2012-07-12Fix leaked fdsThomas White
2012-07-12FormattingThomas White
2012-07-11More memory leaksThomas White
2012-07-11Fix a load of memory leaksThomas White
2012-07-08FormattingThomas White
2012-07-08Write stream without using a lock at allThomas White
2012-07-03Tweak error messagesThomas White
2012-07-03Use fdopen() instead of fopen()Thomas White
2012-07-03Locking fussinessThomas White
2012-07-03indexamajig: Remove benign "timeout" messageThomas White
2012-07-02Merge branch 'master' into tom/speedThomas White
Conflicts: libcrystfel/src/peaks.c src/indexamajig.c
2012-06-21More fussinessThomas White
2012-06-06FormattingThomas White
2012-05-30Tighten up file and error handlingThomas White
2012-05-29Handle the end of the file list cleanlyThomas White
2012-05-29Fix select() callThomas White
2012-05-29WIPThomas White
2012-05-29indexamajig: Fix includesThomas White
2012-05-25WIP on tidy-upThomas White
2012-05-22WIP on tidy-upThomas White
2012-05-22Remove trailing whitespaceThomas White