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path: root/src/indexamajig.c
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2014-10-23Fix a load of memory leaksThomas White
2014-09-22Beam file removal, part IThomas White
2014-09-19Introduce CrystFEL unit cell filesThomas White
2014-08-13indexamajig: Add --highresThomas White
2014-07-21Copy geometry file into streamValerio Mariani
2014-06-20indexamajig: Add --peak-radiusThomas White
2014-05-22Rationalise and document stream "open for write" functionsThomas White
A nice side-effect is that streams now only have one set of headers
2014-05-22Fix permissions of newly created stream filesThomas White
The user's umask should prevent all the streams from being (eg) world writable.
2014-05-21Added reporting of version number to all program and stream fileValerio Mariani
2014-05-08Strip out the "prepare_filename" rubbishThomas White
2014-04-09Remove vestigial "closer-peak" optionThomas White
2014-04-08indexamajig: Add --push-resThomas White
2014-03-26indexamajig: Don't check SNR with --peaks=hdf5 unless given --check-hdf5-snrThomas White
2014-03-03Add things to stream if they were mentioned in beam or geom, and remove ↵Thomas White
clen_ entries
2014-02-02indexamajig: Make --integrate-saturated work againThomas White
This option is provided for backwards compatibility
2013-11-29indexamajig: Add --int-diag=strongThomas White
2013-11-23indexamajig: Ignore -j if --int-cond is usedThomas White
2013-11-23indexamajig: Add --int-diag=implausibleThomas White
2013-11-23Add --int-diag=negativeThomas White
2013-11-23More fixes for --int-diagThomas White
2013-11-23indexamajig: Add --int-diagThomas White
2013-10-10indexamajig: Add --temp-dirThomas White
2013-06-10indexamajig: Fix default integration methodThomas White
2013-06-06Set default integration method to "rings-nocen"Thomas White
Applying the Principle of Least Surprise before merging to master. Previously, it was rings-cen.
2013-06-01Fix memory leak (properly)Thomas White
2013-06-01Fix memory leaksThomas White
2013-05-30Update docsThomas White
2013-05-30indexamajig: Get rid of --use-saturated, because it's now the defaultThomas White
2013-05-30indexamajig: Get rid of --min-integration-snrThomas White
This functionality belongs in process_hkl.
2013-05-28--use-saturated should be the defaultThomas White
2013-05-27Initial integration stuffThomas White
2013-03-11Get rid of "--filter-cm"Thomas White
This was completely specific to pnCCDs, and not even properly general to the different configurations there.
2013-03-11indexamajig: Add --median-filterThomas White
2013-03-01indexamajig: Fix default behaviour for --integrate-saturatedThomas White
2013-02-22Avoid the use of stdio for writing to final streamThomas White
Something really weird goes on when using stdio
2013-02-18indexamajig: Remove --verbose optionThomas White
This hasn't done anything at all since the new indexing subsystem, and hasn't done anything useful for a lot longer.
2013-02-18Whoops: what was labelled as "gradient" was actually "squared gradient"Thomas White
2013-02-09Fussiness, formatting and SPOTThomas White
2013-02-09Fix optionsThomas White
2013-02-09Rework indexamajig option processingThomas White
2013-02-09uncenter_cell: Free transformation if it's not needed by the callerThomas White
2013-02-09Restore control over what goes in the streamThomas White
2013-02-09Clarify lattice type informationThomas White
2013-02-08Small tweaksThomas White
2013-02-08Put the command line back in the streamThomas White
2013-02-08Update docs, comments etcThomas White
2013-02-05Fixes for indexing pipelineThomas White
2013-02-05Indexing pipeline - "done"!Thomas White
2013-02-04Indexing stuffThomas White
2013-01-10Handle '?' return value from getopt_long()Thomas White
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