CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2019-07-17	partial_sim: Use Spectrum API	Thomas White

2019-06-25	partial_sim: Add --template-stream	Thomas White

2019-06-25	partial_sim: Add missing initialisations	Thomas White

2019-05-29	Use Spectrum API for simulation	Thomas White

2019-05-14	Remove image.num_peaks and num_saturated_peaks	Thomas White
	These values were inconsistently set by different parts of the code, e.g. different peak search methods. num_saturated_peaks was even set during final integration. Now, the peak count is taken from the ImageFeatureList, so it's authoritative.
2018-09-10	Change image.spectrum to image.spectrum0 to use a different structure for ↵	Alexandra Tolstikova
	spectrum.
2018-05-17	Merge branch 'tom/cmake'	Thomas White

2018-03-13	Nicer way of getting Git revision	Thomas White
	This will need a separate way to create the official releases (which shouldn't have Git revisions attached)
2018-02-27	partial_sim: Update parameter display	Thomas White

2018-02-27	New partiality model from Ginn et al.	Thomas White

2018-02-27	Separate partiality calculation from prediction	Thomas White

2017-10-23	Check return values from fread/fgets	Thomas White

2017-10-19	partial_sim: Write the symmetry to the reflection list	Thomas White

2017-10-19	partial_sim: Show the symmetry of the reflection list	Thomas White

2017-10-19	partial_sim: Use symmetry from file	Thomas White

2017-08-09	partial_sim: Add missing bracket in parameter list	Thomas White

2016-07-15	partial_sim: Fix rounding for sketches	Thomas White

2016-07-01	Remove slab-relative coordinates from partial_sim and pattern_sim	Thomas White

2015-10-05	partial_sim: Remove image->data	Thomas White

2015-04-20	partial_sim: Initialise stuff	Thomas White

2015-04-20	partial_sim: Complain if geometry contains HDF5 references	Thomas White

2015-04-20	partial_sim: Update --help and manual	Thomas White

2015-01-20	Add informational messages when symmetry doesn't match for monoclinic point ↵	Thomas White
	groups
2014-12-09	Capitalise all warnings	Thomas White

2014-11-24	Fixed stream I/O across different versions	Valerio Mariani

2014-11-14	pattern_sim, partial_sim: List all simulation parameters at start	Thomas White

2014-11-14	Allow geometry files to not contain photon_energy	Thomas White

2014-11-09	Add warnings to everything which used to take a beam file	Thomas White

2014-09-25	Remove "sphere", "thin" and "gaussian" partiality models, add "scgaussian"	Thomas White

2014-09-24	Remove bandwidth, divergence and profile radius from struct beam_params	Thomas White

2014-09-24	Remove beam radius and nphotons from struct beam_params	Thomas White

2014-09-22	Beam file removal, part I	Thomas White

2014-09-19	Introduce CrystFEL unit cell files	Thomas White

2014-09-12	partial_sim: Initialise image.event to NULL	Thomas White

2014-09-05	Multi-event mode	Valerio Mariani

2014-09-05	Updated author lists	Valerio Mariani

2014-09-05	Refactoring of hdf5 reading and writing functions	Valerio Mariani

2014-08-12	partial_sim: Fix free(geomfile)	Thomas White

2014-07-21	Copy geometry file into stream	Valerio Mariani

2014-06-25	Pass the partiality model down from the API level	Thomas White

2014-06-16	partial_sim: Don't assume input reflection list is in asymmetric unit	Thomas White

2014-05-21	Added reporting of version number to all program and stream file	Valerio Mariani

2014-05-08	Make partial sim write command line into stream file	Valerio Mariani

2014-04-29	partial_sim: Add --background	Thomas White

2014-03-24	partial_sim: Update documentation	Thomas White

2014-03-18	partial_sim: Fix memory leaks	Thomas White

2014-03-18	partial_sim: Fix filename memory corruption when using -j	Thomas White

2014-02-12	partial_sim: Add --images	Thomas White

2014-01-20	partial_sim: Add --really-random	Thomas White

2014-01-20	RNG overhaul	Thomas White
	Previously, we were using random(), which is really really bad.