CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2017-09-04	pattern_sim: Add crystal orientation and basis vectors	Thomas White

2017-07-04	Add a missing newline	Thomas White

2016-11-04	Add (more) warnings about unique axes	Thomas White

2016-10-06	pattern_sim: Zero image array before each frame	Thomas White

2016-10-06	pattern_sim: Free stuff at end	Thomas White

2016-07-01	Remove slab-relative coordinates from partial_sim and pattern_sim	Thomas White

2016-02-09	pattern_sim: Initialise stuff for powder HDF5	Thomas White

2015-10-05	pattern_sim: Remove image->data (CPU only)	Thomas White

2015-07-08	pattern_sim: Add check for HDF5 references	Thomas White
	This trips everyone up.
2015-07-08	pattern_sim: Fix displayed pulse energy	Thomas White

2015-06-16	pattern_sim: Update documentation and messages	Thomas White

2015-01-20	Add informational messages when symmetry doesn't match for monoclinic point ↵	Thomas White
	groups
2014-11-18	pattern_sim: State where the intensities came from	Thomas White

2014-11-18	pattern_sim: Save photon energy at specified location	Thomas White

2014-11-17	pattern_sim: Background is in photons, not ADU	Thomas White

2014-11-17	Formatting	Thomas White

2014-11-14	pattern_sim: Better error trapping	Thomas White

2014-11-14	Revert update of old deprecated reflection list format	Thomas White
	Since nothing writes in this modified format (including fs, ss and pn), it makes no sense to be able to read it. This commit reverts a small part of c194bf77.
2014-11-14	pattern_sim, partial_sim: List all simulation parameters at start	Thomas White

2014-11-14	Keep everything in SI base units internally	Thomas White

2014-11-14	Allow geometry files to not contain photon_energy	Thomas White

2014-11-14	Background need not be an integer	Thomas White

2014-11-10	Update docs	Thomas White

2014-11-09	Remove vestigial lines	Thomas White

2014-11-09	Add warnings to everything which used to take a beam file	Thomas White

2014-09-24	Remove bandwidth, divergence and profile radius from struct beam_params	Thomas White

2014-09-24	WTF is this doing here?	Thomas White

2014-09-24	Remove beam radius and nphotons from struct beam_params	Thomas White

2014-09-22	Formatting	Thomas White

2014-09-22	Beam file removal, part I	Thomas White

2014-09-19	Introduce CrystFEL unit cell files	Thomas White

2014-09-09	pattern_sim: Fix handling of centric reflections	Thomas White

2014-09-05	Changed code to use the hdf5_write_image instead of the deprecated hd5_write	Valerio Mariani

2014-09-05	Updated author lists	Valerio Mariani

2014-09-05	Refactoring of peaks and reflections I/O	Valerio Mariani

2014-09-05	Refactoring of hdf5 reading and writing functions	Valerio Mariani

2014-05-21	Added reporting of version number to all program and stream file	Valerio Mariani

2014-02-28	pattern_sim: Add --no-fringes	Thomas White

2014-02-13	pattern_sim: Add --template	Thomas White

2014-01-28	Add two colour spectrum	Chun Hong Yoon

2014-01-23	pattern_sim: Add --background	Thomas White

2014-01-22	pattern_sim: Make spectrum type case-insensitive	Thomas White

2014-01-22	pattern_sim: Update man page, simplify --help	Thomas White

2014-01-20	RNG overhaul	Thomas White
	Previously, we were using random(), which is really really bad.
2014-01-20	pattern_sim: Overhaul and add SASE spectrum simulation	Thomas White

2013-01-10	Handle '?' return value from getopt_long()	Thomas White

2012-12-14	Beam and detector geometry don't need to be copied	Thomas White
	The did when this was all done with threads, but with separate processes each worker has its own copy of the structure already. It can be updated after every image and freed at the end.
2012-12-13	more user options for beam photon energy	Chun Hong Yoon

2012-10-02	Move unit cell utility stuff to separate module	Thomas White

2012-09-04	Fix widespread bug-hiding problem with command line argument handling	Thomas White